Project measure / variable:   Donahue19   pup_survival

ID, description, units MPD:44504   pup_survival   percentage of pups that survived to day 3   [%]  
Data set, strains Donahue19   B6.A consomic w/par   22 strains     sex: f     age: 6-8wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue19 - percentage of pups that survived to day 3



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means92.8   %
Median of the strain means95.4   %
SD of the strain means± 6.77
Coefficient of variation (CV)0.0730
Min–max range of strain means72.3   –   100   %
Mean sample size per strain15.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 25367.6379 1207.9828 4.0789 < 0.0001
Residuals 344 101878.1443 296.1574


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 72.3 35.8   42 5.52 0.495 -3.03
B6.A-Chr1 f 100.0 0.0   10 0.0 0.0 100.0, 100.0 1.06
B6.A-Chr10 f 97.9 7.22   12 2.08 0.0737 75.0, 100.0 0.75
B6.A-Chr11 f 99.2 3.64   21 0.795 0.0367 83.3, 100.0 0.94
B6.A-Chr12 f 89.3 22.1   10 7.0 0.248 28.6, 100.0 -0.52
B6.A-Chr13 f 87.3 15.4   15 3.97 0.176 60.0, 100.0 -0.81
B6.A-Chr14 f 83.9 21.4   14 5.71 0.255 16.7, 100.0 -1.32
B6.A-Chr15 f 95.6 13.3   9 4.44 0.14 60.0, 100.0 0.41
B6.A-Chr16 f 89.8 13.2   16 3.3 0.147 60.0, 100.0 -0.44
B6.A-Chr17 f 95.2 15.6   15 4.03 0.164 40.0, 100.0 0.35
B6.A-Chr18 f 98.7 4.31   11 1.3 0.0437 85.7, 100.0 0.87
B6.A-Chr19 f 96.4 6.15   15 1.59 0.0638 85.7, 100.0 0.53
B6.A-Chr2 f 94.9 8.02   15 2.07 0.0846 77.8, 100.0 0.31
B6.A-Chr3 f 99.2 2.97   14 0.793 0.0299 88.9, 100.0 0.94
B6.A-Chr4 f 99.0 3.82   14 1.02 0.0386 85.7, 100.0 0.91
B6.A-Chr5 f 89.0 20.7   17 5.01 0.232 20.0, 100.0 -0.56
B6.A-Chr6 f 96.9 6.56   10 2.07 0.0677 83.3, 100.0 0.6
B6.A-Chr7 f 84.8 18.0   14 4.82 0.213 42.9, 100.0 -1.18
B6.A-Chr8 f 95.7 8.33   15 2.15 0.0871 71.4, 100.0 0.43
B6.A-Chr9 f 91.1 20.6   15 5.33 0.227 22.2, 100.0 -0.25
B6.A-ChrX f 88.2 23.3   11 7.03 0.264 25.0, 100.0 -0.68
C57BL/6J f 97.4 5.85   51 0.82 0.0601 80.0, 100.0 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 72.3095 2.6554 77.5325 67.0866
B6.A-Chr1 f 100.0 5.442 110.7039 89.2961
B6.A-Chr10 f 97.9167 4.9679 107.6879 88.1454
B6.A-Chr11 f 99.2048 3.7554 106.5911 91.8184
B6.A-Chr12 f 89.28 5.442 99.9839 78.5761
B6.A-Chr13 f 87.2533 4.4434 95.993 78.5137
B6.A-Chr14 f 83.9143 4.5994 92.9607 74.8679
B6.A-Chr15 f 95.5556 5.7364 106.8384 84.2727
B6.A-Chr16 f 89.8187 4.3023 98.2809 81.3566
B6.A-Chr17 f 95.1667 4.4434 103.9063 86.427
B6.A-Chr18 f 98.7 5.1888 108.9057 88.4943
B6.A-Chr19 f 96.4267 4.4434 105.1663 87.687
B6.A-Chr2 f 94.8733 4.4434 103.613 86.1337
B6.A-Chr3 f 99.2071 4.5994 108.2535 90.1607
B6.A-Chr4 f 98.9786 4.5994 108.025 89.9322
B6.A-Chr5 f 89.0 4.1738 97.2095 80.7905
B6.A-Chr6 f 96.9 5.442 107.6039 86.1961
B6.A-Chr7 f 84.7643 4.5994 93.8107 75.7179
B6.A-Chr8 f 95.7333 4.4434 104.473 86.9937
B6.A-Chr9 f 91.08 4.4434 99.8197 82.3403
B6.A-ChrX f 88.2364 5.1888 98.4421 78.0306
C57BL/6J f 97.4098 2.4098 102.1495 92.6701




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA