Project measure / variable:   Donahue19   total_born

ID, description, units MPD:44503   total_born   number of pups born per litter   [n]  
Data set, strains Donahue19   B6.A consomic w/par   22 strains     sex: f     age: 6-8wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue19 - number of pups born per litter



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means7.23   n
Median of the strain means7.17   n
SD of the strain means± 0.796
Coefficient of variation (CV)0.110
Min–max range of strain means5.86   –   8.89   n
Mean sample size per strain15.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 185.5801 8.8371 2.9121 < 0.0001
Residuals 344 1043.9172 3.0346


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 6.76 2.15   42 0.332 0.318 1.0, 10.0 -0.59
B6.A-Chr1 f 8.6 1.51   10 0.476 0.175 6.0, 11.0 1.72
B6.A-Chr10 f 7.0 1.65   12 0.477 0.236 4.0, 10.0 -0.29
B6.A-Chr11 f 5.86 1.35   21 0.295 0.231 4.0, 8.0 -1.72
B6.A-Chr12 f 7.6 2.17   10 0.686 0.286 4.0, 11.0 0.47
B6.A-Chr13 f 5.87 1.36   15 0.35 0.231 4.0, 9.0 -1.71
B6.A-Chr14 f 8.07 1.21   14 0.322 0.149 6.0, 10.0 1.06
B6.A-Chr15 f 8.89 0.928   9 0.309 0.104 7.0, 10.0 2.09
B6.A-Chr16 f 7.44 1.86   16 0.465 0.25 5.0, 11.0 0.27
B6.A-Chr17 f 6.87 1.88   15 0.487 0.274 2.0, 10.0 -0.45
B6.A-Chr18 f 6.73 1.42   11 0.428 0.211 4.0, 8.0 -0.62
B6.A-Chr19 f 7.2 1.37   15 0.355 0.191 4.0, 9.0 -0.03
B6.A-Chr2 f 7.4 1.72   15 0.445 0.233 3.0, 9.0 0.22
B6.A-Chr3 f 7.86 1.46   14 0.39 0.186 4.0, 10.0 0.8
B6.A-Chr4 f 6.86 1.61   14 0.43 0.235 4.0, 10.0 -0.46
B6.A-Chr5 f 7.59 2.27   17 0.549 0.299 2.0, 11.0 0.46
B6.A-Chr6 f 8.1 1.2   10 0.379 0.148 6.0, 10.0 1.1
B6.A-Chr7 f 6.43 1.55   14 0.416 0.242 4.0, 9.0 -1.0
B6.A-Chr8 f 7.13 1.73   15 0.446 0.242 3.0, 10.0 -0.12
B6.A-Chr9 f 6.8 1.61   15 0.416 0.237 4.0, 10.0 -0.54
B6.A-ChrX f 6.27 2.49   11 0.752 0.398 3.0, 10.0 -1.2
C57BL/6J f 7.67 1.76   51 0.247 0.23 4.0, 10.0 0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 6.7619 0.2688 7.2906 6.2332
B6.A-Chr1 f 8.6 0.5509 9.6835 7.5165
B6.A-Chr10 f 7.0 0.5029 7.9891 6.0109
B6.A-Chr11 f 5.8571 0.3801 6.6048 5.1095
B6.A-Chr12 f 7.6 0.5509 8.6835 6.5165
B6.A-Chr13 f 5.8667 0.4498 6.7513 4.982
B6.A-Chr14 f 8.0714 0.4656 8.9872 7.1557
B6.A-Chr15 f 8.8889 0.5807 10.031 7.7468
B6.A-Chr16 f 7.4375 0.4355 8.2941 6.5809
B6.A-Chr17 f 6.8667 0.4498 7.7513 5.982
B6.A-Chr18 f 6.7273 0.5252 7.7604 5.6942
B6.A-Chr19 f 7.2 0.4498 8.0847 6.3153
B6.A-Chr2 f 7.4 0.4498 8.2847 6.5153
B6.A-Chr3 f 7.8571 0.4656 8.7729 6.9414
B6.A-Chr4 f 6.8571 0.4656 7.7729 5.9414
B6.A-Chr5 f 7.5882 0.4225 8.4192 6.7572
B6.A-Chr6 f 8.1 0.5509 9.1835 7.0165
B6.A-Chr7 f 6.4286 0.4656 7.3443 5.5128
B6.A-Chr8 f 7.1333 0.4498 8.018 6.2487
B6.A-Chr9 f 6.8 0.4498 7.6847 5.9153
B6.A-ChrX f 6.2727 0.5252 7.3058 5.2396
C57BL/6J f 7.6667 0.2439 8.1465 7.1869




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA