Phenotype measure:   Rusyn5   liver_Adipor2_hfe

ID, description, units MPD:43052   liver_Adipor2_hfe   liver Adipor2, mRNA abundance relative to high-fat-only group   [%]
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   6 strains     sex: m     age: 8-14wks
Procedure RNA expression profiling
Ontology mappings

  STRAIN COMPARISON PLOT
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Rusyn5 - liver Adipor2, mRNA abundance relative to high-fat-only group



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means84.7   %
Median of the strain means69.8   %
SD of the strain means± 36.3
Coefficient of variation (CV)0.429
Min–max range of strain means59.7   –   155   %
Mean sample size per strain2.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 19775.1044 3955.0209 4.7654 0.0146
Residuals 11 9129.4778 829.9525


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 74.5 44.7   3 25.8 0.6 27.4, 116.0 -0.28
C57BL/10J m 62.3 2.16   3 1.25 0.0346 59.8, 63.6 -0.62
KK/HlJ m 59.7 17.7   3 10.2 0.296 43.2, 78.3 -0.69
NZW/LacJ m 65.1 11.4   3 6.59 0.175 58.0, 78.2 -0.54
PWD/PhJ m 91.3 7.37   2   5.21 0.0807 86.1, 96.6 0.18
WSB/EiJ m 155.0 45.7   3 26.4 0.295 126.0, 208.0 1.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 74.55 16.6328 111.1586 37.9414
C57BL/10J m 62.33 16.6328 98.9386 25.7214
KK/HlJ m 59.7233 16.6328 96.3319 23.1147
NZW/LacJ m 65.0567 16.6328 101.6653 28.4481
PWD/PhJ m 91.35 20.371 136.1862 46.5138
WSB/EiJ m 155.0567 16.6328 191.6653 118.4481




GWAS analysis not available: At least 12 strains are required