Project measure / variable:   Rusyn5   liver_TG_hfe

ID, description, units MPD:43022   liver_TG_hfe   hepatic triglycerides (TG)   [mg/g]  high-fat and ethanol  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   6 strains     sex: m     age: 8-14wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rusyn5 - hepatic triglycerides (TG) high-fat and ethanol



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means47.9   mg/g
Median of the strain means54.7   mg/g
SD of the strain means± 29.9
Coefficient of variation (CV)0.625
Min–max range of strain means7.39   –   80.6   mg/g
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 13423.9214 2684.7843 43.8041 < 0.0001
Residuals 12 735.4883 61.2907


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 46.4 14.2   3 8.21 0.307 31.1, 59.3 -0.05
C57BL/10J m 63.0 3.47   3 2.01 0.0551 59.1, 65.8 0.51
KK/HlJ m 72.5 9.67   3 5.58 0.133 62.2, 81.5 0.82
NZW/LacJ m 80.6 7.5   3 4.33 0.0931 72.0, 85.5 1.09
PWD/PhJ m 7.39 1.6   3 0.923 0.216 6.07, 9.17 -1.35
WSB/EiJ m 17.4 1.03   3 0.593 0.059 16.3, 18.3 -1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 46.37 4.52 56.2182 36.5218
C57BL/10J m 63.0467 4.52 72.8949 53.1985
KK/HlJ m 72.4667 4.52 82.3149 62.6185
NZW/LacJ m 80.61 4.52 90.4582 70.7618
PWD/PhJ m 7.3933 4.52 17.2415 0.0
WSB/EiJ m 17.4267 4.52 27.2749 7.5785




  GWAS USING LINEAR MIXED MODELS