Project measure / variable:   Rusyn5   liver_TG_hf

ID, description, units MPD:43021   liver_TG_hf   hepatic triglycerides (TG)   [mg/g]  high-fat only  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   6 strains     sex: m     age: 8-14wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rusyn5 - hepatic triglycerides (TG) high-fat only



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means10.1   mg/g
Median of the strain means6.67   mg/g
SD of the strain means± 6.55
Coefficient of variation (CV)0.651
Min–max range of strain means4.79   –   20.3   mg/g
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 641.4203 128.2841 4.5552 0.0146
Residuals 12 337.9448 28.1621


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 6.9 1.2   3 0.695 0.174 5.55, 7.86 -0.48
C57BL/10J m 6.43 0.36   3 0.208 0.056 6.11, 6.82 -0.55
KK/HlJ m 16.3 12.2   3 7.04 0.75 3.05, 27.1 0.95
NZW/LacJ m 20.3 4.05   3 2.34 0.2 17.1, 24.9 1.56
PWD/PhJ m 5.62 0.923   3 0.533 0.164 4.64, 6.47 -0.68
WSB/EiJ m 4.79 1.26   3 0.726 0.263 3.34, 5.58 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 6.9 3.0639 13.5756 0.2244
C57BL/10J m 6.43 3.0639 13.1056 0.0
KK/HlJ m 16.2567 3.0639 22.9323 9.581
NZW/LacJ m 20.2967 3.0639 26.9723 13.621
PWD/PhJ m 5.6233 3.0639 12.299 0.0
WSB/EiJ m 4.79 3.0639 11.4656 0.0




  GWAS USING LINEAR MIXED MODELS