Project measure / variable:   Rusyn5   inflammation_hf

ID, description, units MPD:43015   inflammation_hf   liver inflammation (0-2)   [score]  high-fat only  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   14 strains     sex: m     age: 8-14wks
Procedure histopathology
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rusyn5 - liver inflammation (0-2) high-fat only



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means1.07   score
Median of the strain means1.00   score
SD of the strain means± 0.479
Coefficient of variation (CV)0.447
Min–max range of strain means0.333   –   2.00   score
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 8.9524 0.6886 2.4615 0.0223
Residuals 28 7.8333 0.2798


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.5 0.0   3 0.0 0.0 0.5, 0.5 -1.19
AKR/J m 0.833 1.04   3 0.601 1.25 -0.5
BALB/cByJ m 0.667 0.289   3 0.167 0.433 0.5, 1.0 -0.84
BALB/cJ m 1.17 0.764   3 0.441 0.655 0.5, 2.0 0.2
BTBR T+ Itpr3tf/J m 0.833 0.289   3 0.167 0.346 0.5, 1.0 -0.5
C3H/HeJ m 0.333 0.289   3 0.167 0.866 -1.54
C57BL/10J m 1.17 0.289   3 0.167 0.247 1.0, 1.5 0.2
DBA/2J m 1.17 0.764   3 0.441 0.655 0.5, 2.0 0.2
FVB/NJ m 1.0 0.866   3 0.5 0.866 0.5, 2.0 -0.15
KK/HlJ m 2.0 0.0   3 0.0 0.0 2.0, 2.0 1.94
MOLF/EiJ m 2.0 0.0   3 0.0 0.0 2.0, 2.0 1.94
NZW/LacJ m 1.0 0.5   3 0.289 0.5 0.5, 1.5 -0.15
PWD/PhJ m 1.33 0.289   3 0.167 0.217 1.0, 1.5 0.54
WSB/EiJ m 1.0 0.5   3 0.289 0.5 0.5, 1.5 -0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.5 0.3054 1.1255 0.0
AKR/J m 0.8333 0.3054 1.4589 0.2078
BALB/cByJ m 0.6667 0.3054 1.2922 0.0411
BALB/cJ m 1.1667 0.3054 1.7922 0.5411
BTBR T+ Itpr3tf/J m 0.8333 0.3054 1.4589 0.2078
C3H/HeJ m 0.3333 0.3054 0.9589 0.0
C57BL/10J m 1.1667 0.3054 1.7922 0.5411
DBA/2J m 1.1667 0.3054 1.7922 0.5411
FVB/NJ m 1.0 0.3054 1.6255 0.3745
KK/HlJ m 2.0 0.3054 2.6255 1.3745
MOLF/EiJ m 2.0 0.3054 2.6255 1.3745
NZW/LacJ m 1.0 0.3054 1.6255 0.3745
PWD/PhJ m 1.3333 0.3054 1.9589 0.7078
WSB/EiJ m 1.0 0.3054 1.6255 0.3745




  GWAS USING LINEAR MIXED MODELS