Project measure / variable:   Donahue15   litter_size_wean

ID, description, units MPD:42404   litter_size_wean   mean number of pups weaned   [n]  
Data set, strains Donahue15   BXH   11 strains     sex: f     age: 3-55wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue15 - mean number of pups weaned



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested11 strains
Mean of the strain means4.37   n
Median of the strain means4.31   n
SD of the strain means± 0.907
Coefficient of variation (CV)0.208
Min–max range of strain means3.10   –   6.41   n
Mean sample size per strain8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 65.8326 6.5833 5.6679 < 0.0001
Residuals 76 88.2736 1.1615


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXH10/TyJ f 4.21 0.757   8 0.268 0.18 3.2, 5.0 -0.17
BXH14/TyJ f 4.41 1.27   7 0.481 0.288 2.5, 6.0 0.05
BXH19/TyJ f 3.81 1.54   8 0.544 0.404 1.8, 6.5 -0.61
BXH20/KccJ f 3.51 0.808   8 0.286 0.23 2.0, 4.3 -0.95
BXH22/KccJ f 6.41 1.27   8 0.45 0.198 4.3, 8.0 2.25
BXH2/TyJ f 3.71 1.03   8 0.363 0.276 2.4, 5.3 -0.72
BXH4/TyJ f 4.51 0.745   8 0.264 0.165 3.7, 5.5 0.16
BXH6/TyJ f 5.17 0.757   8 0.268 0.146 4.1, 6.0 0.89
BXH7/TyJ f 4.89 1.38   8 0.487 0.282 2.7, 7.0 0.58
BXH8/TyJ f 3.1 1.06   8 0.373 0.341 1.4, 4.5 -1.4
BXH9/TyJ f 4.31 0.903   8 0.319 0.209 2.7, 5.6 -0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXH10/TyJ f 4.2125 0.381 4.9714 3.4536
BXH14/TyJ f 4.4143 0.4073 5.2256 3.603
BXH19/TyJ f 3.8125 0.381 4.5714 3.0536
BXH20/KccJ f 3.5125 0.381 4.2714 2.7536
BXH22/KccJ f 6.4125 0.381 7.1714 5.6536
BXH2/TyJ f 3.7125 0.381 4.4714 2.9536
BXH4/TyJ f 4.5125 0.381 5.2714 3.7536
BXH6/TyJ f 5.175 0.381 5.9339 4.4161
BXH7/TyJ f 4.8875 0.381 5.6464 4.1286
BXH8/TyJ f 3.1 0.381 3.8589 2.3411
BXH9/TyJ f 4.3125 0.381 5.0714 3.5536




  GWAS USING LINEAR MIXED MODELS