Project measure / variable:   Donahue13   litter_interval

ID, description, units MPD:42202   litter_interval   mean litter interval   [wks]  
Data set, strains Donahue13   CXB   13 strains     sex: f     age: 3-50wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue13 - mean litter interval



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested13 strains
Mean of the strain means5.14   wks
Median of the strain means5.16   wks
SD of the strain means± 0.785
Coefficient of variation (CV)0.153
Min–max range of strain means4.02   –   6.40   wks
Mean sample size per strain8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 12 58.8962 4.908 5.1831 < 0.0001
Residuals 90 85.2236 0.9469


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CXB10/HiAJ f 4.12 0.701   8 0.248 0.17 3.1, 5.4 -1.3
CXB11/HiAJ f 6.0 0.821   8 0.29 0.137 5.2, 7.4 1.1
CXB12/HiAJ f 4.02 0.715   8 0.253 0.178 3.3, 5.4 -1.43
CXB13/HiAJ f 5.46 0.663   8 0.234 0.121 4.4, 6.3 0.41
CXB1/ByJ f 5.41 1.6   7 0.606 0.296 4.2, 8.7 0.35
CXB2/ByJ f 4.79 0.544   8 0.192 0.114 4.2, 5.6 -0.44
CXB3/ByJ f 4.92 0.721   8 0.255 0.146 4.0, 5.9 -0.28
CXB4/ByJ f 4.69 0.768   8 0.272 0.164 4.0, 6.1 -0.57
CXB5/ByJ f 5.16 1.28   8 0.452 0.248 3.8, 8.0 0.03
CXB6/ByJ f 5.48 0.979   8 0.346 0.179 4.1, 7.0 0.44
CXB7/ByJ f 6.4 0.847   8 0.299 0.132 5.3, 7.4 1.61
CXB8/HiAJ f 6.2 1.59   8 0.562 0.256 3.0, 8.8 1.35
CXB9/HiAJ f 4.15 0.784   8 0.277 0.189 3.1, 5.3 -1.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CXB10/HiAJ f 4.125 0.344 4.8085 3.4415
CXB11/HiAJ f 6.0 0.344 6.6835 5.3165
CXB12/HiAJ f 4.025 0.344 4.7085 3.3415
CXB13/HiAJ f 5.4625 0.344 6.146 4.779
CXB1/ByJ f 5.4143 0.3678 6.145 4.6836
CXB2/ByJ f 4.7875 0.344 5.471 4.104
CXB3/ByJ f 4.925 0.344 5.6085 4.2415
CXB4/ByJ f 4.6875 0.344 5.371 4.004
CXB5/ByJ f 5.1625 0.344 5.846 4.479
CXB6/ByJ f 5.475 0.344 6.1585 4.7915
CXB7/ByJ f 6.4 0.344 7.0835 5.7165
CXB8/HiAJ f 6.2 0.344 6.8835 5.5165
CXB9/HiAJ f 4.15 0.344 4.8335 3.4665




  GWAS USING LINEAR MIXED MODELS