Project measure / variable:   Donahue11   ratio_wean_born

ID, description, units MPD:42005   ratio_wean_born   ratio of pups weaned to pups born   [ratio]  
Data set, strains Donahue11   B6.PWD consomic   26 strains     sex: f     age: 4-55wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Donahue11 - ratio of pups weaned to pups born

B6.PWD-Chr5B6.PWD-Chr14B6.PWD-Chr16B6.PWD-Chr15B6.PWD-Chr10.2B6.PWD-Chr1B6.PWD-ChrX.3B6.PWD-Chr12B6.PWD-Chr19B6.PWD-Chr18B6.PWD-Chr9B6.PWD-Chr13B6.PWD-Chr10.3B6.PWD-Chr11.2B6.PWD-Chr11.1B6.PWD-Chr17B6.PWD-ChrX.1B6.PWD-ChrYB6.PWD-Chr2B6.PWD-Chr4B6.PWD-Chr3B6.PWD-ChrX.2B6.PWD-Chr10.1B6.PWD-Chr6B6.PWD-Chr11.3B6.PWD-Chr8 ratio 0.00.10.20.30.40.50.60.70.80.91.0femalemale


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested26 strains
Mean of the strain means0.698   ratio
Median of the strain means0.716   ratio
SD of the strain means± 0.104
Coefficient of variation (CV)0.149
Min–max range of strain means0.484   –   0.883   ratio
Mean sample size per strain11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 2.9782 0.1191 1.6802 0.0249
Residuals 268 19.0018 0.0709


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 26 (26)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
B6.PWD-Chr1 f 0.783 0.221   12 0.0638 0.282 0.3, 1.0 0.82
B6.PWD-Chr10.1 f 0.58 0.345   15 0.089 0.594 -1.14
B6.PWD-Chr10.2 f 0.8 0.141   2   0.1 0.177 0.7, 0.9 0.98
B6.PWD-Chr10.3 f 0.719 0.136   21 0.0298 0.19 0.5, 1.0 0.2
B6.PWD-Chr11.1 f 0.712 0.318   8 0.113 0.447 0.14
B6.PWD-Chr11.2 f 0.714 0.248   7 0.0937 0.347 0.3, 1.0 0.16
B6.PWD-Chr11.3 f 0.514 0.186   7 0.0705 0.363 0.3, 0.9 -1.77
B6.PWD-Chr12 f 0.76 0.158   10 0.0499 0.208 0.5, 1.0 0.6
B6.PWD-Chr13 f 0.722 0.377   9 0.126 0.522 0.23
B6.PWD-Chr14 f 0.838 0.213   8 0.0754 0.255 0.4, 1.0 1.35
B6.PWD-Chr15 f 0.83 0.177   10 0.0559 0.213 0.5, 1.0 1.27
B6.PWD-Chr16 f 0.833 0.137   6 0.0558 0.164 0.7, 1.0 1.3
B6.PWD-Chr17 f 0.711 0.33   9 0.11 0.463 0.13
B6.PWD-Chr18 f 0.729 0.243   14 0.065 0.334 0.2, 1.0 0.3
B6.PWD-Chr19 f 0.731 0.273   16 0.0681 0.373 0.32
B6.PWD-Chr2 f 0.633 0.312   9 0.104 0.493 -0.63
B6.PWD-Chr3 f 0.613 0.253   8 0.0895 0.413 0.3, 1.0 -0.82
B6.PWD-Chr4 f 0.627 0.381   15 0.0983 0.608 -0.68
B6.PWD-Chr5 f 0.883 0.159   12 0.0458 0.18 0.5, 1.0 1.79
B6.PWD-Chr6 f 0.537 0.272   8 0.0962 0.506 -1.55
B6.PWD-Chr8 f 0.484 0.308   19 0.0706 0.636 -2.06
B6.PWD-Chr9 f 0.729 0.138   7 0.0522 0.189 0.6, 1.0 0.3
B6.PWD-ChrX.1 f 0.645 0.291   11 0.0878 0.451 -0.51
B6.PWD-ChrX.2 f 0.611 0.295   18 0.0695 0.482 -0.84
B6.PWD-ChrX.3 f 0.762 0.222   13 0.0615 0.291 0.4, 1.0 0.62
B6.PWD-ChrY f 0.645 0.284   20 0.0634 0.44 -0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 0.7833 0.0769 0.9347 0.632
B6.PWD-Chr10.1 f 0.58 0.0688 0.7154 0.4446
B6.PWD-Chr10.2 f 0.8 0.1883 1.1707 0.4293
B6.PWD-Chr10.3 f 0.719 0.0581 0.8334 0.6046
B6.PWD-Chr11.1 f 0.7125 0.0941 0.8979 0.5271
B6.PWD-Chr11.2 f 0.7143 0.1006 0.9124 0.5161
B6.PWD-Chr11.3 f 0.5143 0.1006 0.7124 0.3161
B6.PWD-Chr12 f 0.76 0.0842 0.9258 0.5942
B6.PWD-Chr13 f 0.7222 0.0888 0.897 0.5475
B6.PWD-Chr14 f 0.8375 0.0941 1.0229 0.6521
B6.PWD-Chr15 f 0.83 0.0842 0.9958 0.6642
B6.PWD-Chr16 f 0.8333 0.1087 1.0474 0.6193
B6.PWD-Chr17 f 0.7111 0.0888 0.8859 0.5364
B6.PWD-Chr18 f 0.7286 0.0712 0.8687 0.5885
B6.PWD-Chr19 f 0.7313 0.0666 0.8623 0.6002
B6.PWD-Chr2 f 0.6333 0.0888 0.8081 0.4586
B6.PWD-Chr3 f 0.6125 0.0941 0.7979 0.4271
B6.PWD-Chr4 f 0.6267 0.0688 0.762 0.4913
B6.PWD-Chr5 f 0.8833 0.0769 1.0347 0.732
B6.PWD-Chr6 f 0.5375 0.0941 0.7229 0.3521
B6.PWD-Chr8 f 0.4842 0.0611 0.6045 0.3639
B6.PWD-Chr9 f 0.7286 0.1006 0.9267 0.5304
B6.PWD-ChrX.1 f 0.6455 0.0803 0.8035 0.4874
B6.PWD-ChrX.2 f 0.6111 0.0628 0.7347 0.4875
B6.PWD-ChrX.3 f 0.7615 0.0739 0.9069 0.6161
B6.PWD-ChrY f 0.645 0.0595 0.7622 0.5278




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA