Project measure / variable:   Donahue11   ratio_wean_born

ID, description, units MPD:42005   ratio_wean_born   ratio of pups weaned to pups born   [ratio]  
Data set, strains Donahue11   B6.PWD consomic   26 strains     sex: f     age: 4-55wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue11 - ratio of pups weaned to pups born



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested26 strains
Mean of the strain means0.698   ratio
Median of the strain means0.716   ratio
SD of the strain means± 0.104
Coefficient of variation (CV)0.149
Min–max range of strain means0.484   –   0.883   ratio
Mean sample size per strain11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 2.9782 0.1191 1.6802 0.0249
Residuals 268 19.0018 0.0709


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 0.783 0.221   12 0.0638 0.282 0.3, 1.0 0.82
B6.PWD-Chr10.1 f 0.58 0.345   15 0.089 0.594 -1.14
B6.PWD-Chr10.2 f 0.8 0.141   2   0.1 0.177 0.7, 0.9 0.98
B6.PWD-Chr10.3 f 0.719 0.136   21 0.0298 0.19 0.5, 1.0 0.2
B6.PWD-Chr11.1 f 0.712 0.318   8 0.113 0.447 0.14
B6.PWD-Chr11.2 f 0.714 0.248   7 0.0937 0.347 0.3, 1.0 0.16
B6.PWD-Chr11.3 f 0.514 0.186   7 0.0705 0.363 0.3, 0.9 -1.77
B6.PWD-Chr12 f 0.76 0.158   10 0.0499 0.208 0.5, 1.0 0.6
B6.PWD-Chr13 f 0.722 0.377   9 0.126 0.522 0.23
B6.PWD-Chr14 f 0.838 0.213   8 0.0754 0.255 0.4, 1.0 1.35
B6.PWD-Chr15 f 0.83 0.177   10 0.0559 0.213 0.5, 1.0 1.27
B6.PWD-Chr16 f 0.833 0.137   6 0.0558 0.164 0.7, 1.0 1.3
B6.PWD-Chr17 f 0.711 0.33   9 0.11 0.463 0.13
B6.PWD-Chr18 f 0.729 0.243   14 0.065 0.334 0.2, 1.0 0.3
B6.PWD-Chr19 f 0.731 0.273   16 0.0681 0.373 0.32
B6.PWD-Chr2 f 0.633 0.312   9 0.104 0.493 -0.63
B6.PWD-Chr3 f 0.613 0.253   8 0.0895 0.413 0.3, 1.0 -0.82
B6.PWD-Chr4 f 0.627 0.381   15 0.0983 0.608 -0.68
B6.PWD-Chr5 f 0.883 0.159   12 0.0458 0.18 0.5, 1.0 1.79
B6.PWD-Chr6 f 0.537 0.272   8 0.0962 0.506 -1.55
B6.PWD-Chr8 f 0.484 0.308   19 0.0706 0.636 -2.06
B6.PWD-Chr9 f 0.729 0.138   7 0.0522 0.189 0.6, 1.0 0.3
B6.PWD-ChrX.1 f 0.645 0.291   11 0.0878 0.451 -0.51
B6.PWD-ChrX.2 f 0.611 0.295   18 0.0695 0.482 -0.84
B6.PWD-ChrX.3 f 0.762 0.222   13 0.0615 0.291 0.4, 1.0 0.62
B6.PWD-ChrY f 0.645 0.284   20 0.0634 0.44 -0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 0.7833 0.0769 0.9347 0.632
B6.PWD-Chr10.1 f 0.58 0.0688 0.7154 0.4446
B6.PWD-Chr10.2 f 0.8 0.1883 1.1707 0.4293
B6.PWD-Chr10.3 f 0.719 0.0581 0.8334 0.6046
B6.PWD-Chr11.1 f 0.7125 0.0941 0.8979 0.5271
B6.PWD-Chr11.2 f 0.7143 0.1006 0.9124 0.5161
B6.PWD-Chr11.3 f 0.5143 0.1006 0.7124 0.3161
B6.PWD-Chr12 f 0.76 0.0842 0.9258 0.5942
B6.PWD-Chr13 f 0.7222 0.0888 0.897 0.5475
B6.PWD-Chr14 f 0.8375 0.0941 1.0229 0.6521
B6.PWD-Chr15 f 0.83 0.0842 0.9958 0.6642
B6.PWD-Chr16 f 0.8333 0.1087 1.0474 0.6193
B6.PWD-Chr17 f 0.7111 0.0888 0.8859 0.5364
B6.PWD-Chr18 f 0.7286 0.0712 0.8687 0.5885
B6.PWD-Chr19 f 0.7313 0.0666 0.8623 0.6002
B6.PWD-Chr2 f 0.6333 0.0888 0.8081 0.4586
B6.PWD-Chr3 f 0.6125 0.0941 0.7979 0.4271
B6.PWD-Chr4 f 0.6267 0.0688 0.762 0.4913
B6.PWD-Chr5 f 0.8833 0.0769 1.0347 0.732
B6.PWD-Chr6 f 0.5375 0.0941 0.7229 0.3521
B6.PWD-Chr8 f 0.4842 0.0611 0.6045 0.3639
B6.PWD-Chr9 f 0.7286 0.1006 0.9267 0.5304
B6.PWD-ChrX.1 f 0.6455 0.0803 0.8035 0.4874
B6.PWD-ChrX.2 f 0.6111 0.0628 0.7347 0.4875
B6.PWD-ChrX.3 f 0.7615 0.0739 0.9069 0.6161
B6.PWD-ChrY f 0.645 0.0595 0.7622 0.5278




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA