Phenotype measure

ID, description, units MPD:41905   litter_size_wean   mean number of pups weaned   [n]
Data set, strains Donahue10   B6.A consomic   20 strains     sex: f     age: 3-53wks
Procedure colony observation
Ontology mappings


  STRAIN COMPARISON PLOT
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Donahue10 - mean number of pups weaned



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested20 strains
Mean of the strain means4.85   n
Median of the strain means4.98   n
SD of the strain means± 0.816
Coefficient of variation (CV)0.168
Min–max range of strain means2.62   –   5.87   n
Mean sample size per strain8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 100.6232 5.296 3.3447 < 0.0001
Residuals 139 220.093 1.5834


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.A-Chr1 f 5.87 1.61   8 0.57 0.274 4.3, 8.3 1.25
B6.A-Chr10 f 4.94 0.968   8 0.342 0.196 3.6, 6.2 0.11
B6.A-Chr11 f 4.16 0.807   8 0.285 0.194 2.7, 5.2 -0.85
B6.A-Chr12 f 5.65 0.857   8 0.303 0.152 4.3, 7.0 0.98
B6.A-Chr13 f 2.62 0.922   8 0.326 0.351 0.8, 3.8 -2.73
B6.A-Chr14 f 5.17 0.814   8 0.288 0.157 4.3, 6.5 0.39
B6.A-Chr15 f 5.7 1.4   8 0.496 0.246 3.9, 7.9 1.04
B6.A-Chr16 f 4.53 1.85   8 0.653 0.408 0.7, 6.4 -0.39
B6.A-Chr17 f 5.59 0.895   8 0.316 0.16 4.0, 7.0 0.9
B6.A-Chr18 f 5.57 1.13   7 0.427 0.203 4.5, 8.0 0.88
B6.A-Chr19 f 5.11 1.42   8 0.502 0.278 3.5, 7.5 0.32
B6.A-Chr2 f 4.05 0.639   8 0.226 0.158 3.0, 4.8 -0.98
B6.A-Chr3 f 4.97 1.41   8 0.5 0.284 2.8, 6.7 0.15
B6.A-Chr4 f 3.55 0.691   8 0.244 0.195 2.7, 4.7 -1.59
B6.A-Chr5 f 4.8 0.862   8 0.305 0.18 3.6, 6.1 -0.06
B6.A-Chr6 f 5.74 1.17   8 0.413 0.203 3.8, 7.3 1.09
B6.A-Chr7 f 4.53 1.54   8 0.546 0.341 2.4, 6.7 -0.39
B6.A-Chr8 f 5.03 1.72   8 0.609 0.343 2.4, 7.7 0.22
B6.A-Chr9 f 4.45 1.29   8 0.457 0.291 3.4, 7.3 -0.49
B6.A-ChrX f 5.0 1.92   8 0.679 0.384 2.7, 8.0 0.18


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.A-Chr1 f 5.875 0.4449 6.7546 4.9954
B6.A-Chr10 f 4.9375 0.4449 5.8171 4.0579
B6.A-Chr11 f 4.1625 0.4449 5.0421 3.2829
B6.A-Chr12 f 5.65 0.4449 6.5296 4.7704
B6.A-Chr13 f 2.625 0.4449 3.5046 1.7454
B6.A-Chr14 f 5.175 0.4449 6.0546 4.2954
B6.A-Chr15 f 5.7 0.4449 6.5796 4.8204
B6.A-Chr16 f 4.525 0.4449 5.4046 3.6454
B6.A-Chr17 f 5.5875 0.4449 6.4671 4.7079
B6.A-Chr18 f 5.5714 0.4756 6.5118 4.6311
B6.A-Chr19 f 5.1125 0.4449 5.9921 4.2329
B6.A-Chr2 f 4.05 0.4449 4.9296 3.1704
B6.A-Chr3 f 4.975 0.4449 5.8546 4.0954
B6.A-Chr4 f 3.55 0.4449 4.4296 2.6704
B6.A-Chr5 f 4.8 0.4449 5.6796 3.9204
B6.A-Chr6 f 5.7375 0.4449 6.6171 4.8579
B6.A-Chr7 f 4.525 0.4449 5.4046 3.6454
B6.A-Chr8 f 5.025 0.4449 5.9046 4.1454
B6.A-Chr9 f 4.45 0.4449 5.3296 3.5704
B6.A-ChrX f 5.0 0.4449 5.8796 4.1204