Phenotype measure

ID, description, units MPD:41904   litter_size_birth   mean number of pups born   [n]
Data set, strains Donahue10   B6.A consomic   20 strains     sex: f     age: 3-53wks
Procedure colony observation
Ontology mappings


  STRAIN COMPARISON PLOT
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Donahue10 - mean number of pups born



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested20 strains
Mean of the strain means5.31   n
Median of the strain means5.45   n
SD of the strain means± 0.857
Coefficient of variation (CV)0.162
Min–max range of strain means2.90   –   6.49   n
Mean sample size per strain8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 111.5663 5.8719 4.4775 < 0.0001
Residuals 139 182.2896 1.3114


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.A-Chr1 f 6.49 1.52   8 0.538 0.234 4.6, 8.8 1.38
B6.A-Chr10 f 5.24 1.08   8 0.383 0.207 3.6, 6.4 -0.08
B6.A-Chr11 f 4.44 0.695   8 0.246 0.157 3.6, 5.8 -1.01
B6.A-Chr12 f 5.99 0.645   8 0.228 0.108 5.2, 7.0 0.8
B6.A-Chr13 f 2.9 0.717   8 0.254 0.247 1.8, 4.0 -2.81
B6.A-Chr14 f 5.94 0.35   8 0.124 0.059 5.4, 6.5 0.74
B6.A-Chr15 f 6.4 1.35   8 0.478 0.211 4.1, 8.3 1.27
B6.A-Chr16 f 5.4 1.24   8 0.44 0.23 3.3, 7.0 0.11
B6.A-Chr17 f 5.85 1.09   8 0.385 0.186 4.0, 7.8 0.63
B6.A-Chr18 f 5.64 1.1   7 0.417 0.196 4.5, 8.0 0.39
B6.A-Chr19 f 5.89 1.22   8 0.432 0.208 4.0, 7.5 0.68
B6.A-Chr2 f 4.44 0.534   8 0.189 0.12 3.8, 5.2 -1.01
B6.A-Chr3 f 6.05 1.33   8 0.469 0.219 3.8, 7.7 0.87
B6.A-Chr4 f 4.32 0.755   8 0.267 0.175 2.9, 5.3 -1.15
B6.A-Chr5 f 5.03 0.911   8 0.322 0.181 3.6, 6.3 -0.32
B6.A-Chr6 f 5.79 1.18   8 0.416 0.203 3.8, 7.4 0.56
B6.A-Chr7 f 4.81 1.55   8 0.549 0.322 2.6, 6.7 -0.58
B6.A-Chr8 f 5.5 1.45   8 0.511 0.263 4.0, 8.0 0.22
B6.A-Chr9 f 4.73 1.11   8 0.394 0.236 3.8, 7.3 -0.67
B6.A-ChrX f 5.31 1.83   8 0.648 0.345 2.8, 8.0 0.0


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.A-Chr1 f 6.4875 0.4049 7.288 5.687
B6.A-Chr10 f 5.2375 0.4049 6.038 4.437
B6.A-Chr11 f 4.4375 0.4049 5.238 3.637
B6.A-Chr12 f 5.9875 0.4049 6.788 5.187
B6.A-Chr13 f 2.9 0.4049 3.7005 2.0995
B6.A-Chr14 f 5.9375 0.4049 6.738 5.137
B6.A-Chr15 f 6.4 0.4049 7.2005 5.5995
B6.A-Chr16 f 5.4 0.4049 6.2005 4.5995
B6.A-Chr17 f 5.85 0.4049 6.6505 5.0495
B6.A-Chr18 f 5.6429 0.4328 6.4987 4.7871
B6.A-Chr19 f 5.8875 0.4049 6.688 5.087
B6.A-Chr2 f 4.4375 0.4049 5.238 3.637
B6.A-Chr3 f 6.05 0.4049 6.8505 5.2495
B6.A-Chr4 f 4.325 0.4049 5.1255 3.5245
B6.A-Chr5 f 5.025 0.4049 5.8255 4.2245
B6.A-Chr6 f 5.7875 0.4049 6.588 4.987
B6.A-Chr7 f 4.8125 0.4049 5.613 4.012
B6.A-Chr8 f 5.5 0.4049 6.3005 4.6995
B6.A-Chr9 f 4.725 0.4049 5.5255 3.9245
B6.A-ChrX f 5.3125 0.4049 6.113 4.512