Project measure / variable:   Jentsch1   acq_anticipatory

ID, description, units MPD:40303   acq_anticipatory   average number of anticipatory responses per trial, acquisition phase   [n]  
Data set, strains Jentsch1   BXD w/par   53 strains     sex: m     age: 17wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Jentsch1 - average number of anticipatory responses per trial, acquisition phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested53 strains
Mean of the strain means2.26   n
Median of the strain means1.95   n
SD of the strain means± 1.35
Coefficient of variation (CV)0.597
Min–max range of strain means0.550   –   6.80   n
Mean sample size per strain3.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 52 270.6053 5.2039 1.4839 0.0396
Residuals 123 431.3447 3.5069


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100/RwwJ m 2.32 1.71   5 0.764 0.736 1.2, 5.3 0.04
BXD102/RwwJ m 2.7 1.06   5 0.474 0.393 1.5, 3.9 0.32
BXD12/TyJ m 1.15 0.0707   2   0.05 0.0615 1.1, 1.2 -0.82
BXD13/TyJ m 2.2 2.12   2   1.5 0.964 0.7, 3.7 -0.05
BXD14/TyJ m 1.2 1.56   2   1.1 1.3 0.1, 2.3 -0.79
BXD16/TyJ m 6.8 1.27   2   0.9 0.187 5.9, 7.7 3.36
BXD18/TyJ m 0.85 0.495   2   0.35 0.582 0.5, 1.2 -1.05
BXD1/TyJ m 3.62 4.09   5 1.83 1.13 0.2, 10.1 1.01
BXD22/TyJ m 1.75 0.354   2   0.25 0.202 1.5, 2.0 -0.38
BXD24/TyJ m 1.7 0.894   5 0.4 0.526 1.0, 3.2 -0.42
BXD25/TyJ m 2.25 1.2   2   0.85 0.534 1.4, 3.1 -0.01
BXD29-Tlr4lps-2J/J m 2.85 3.18   2   2.25 1.12 0.6, 5.1 0.44
BXD2/TyJ m 1.1 0.424   2   0.3 0.386 0.8, 1.4 -0.86
BXD31/TyJ m 2.75 1.5   4 0.75 0.545 1.2, 4.8 0.36
BXD32/TyJ m 4.32 2.65   4 1.32 0.612 1.4, 7.2 1.52
BXD34/TyJ m 1.85 1.38   6 0.565 0.748 0.4, 4.1 -0.31
BXD36/TyJ m 1.0 0.141   2   0.1 0.141 0.9, 1.1 -0.94
BXD38/TyJ m 2.08 1.06   4 0.53 0.511 0.9, 3.2 -0.14
BXD39/TyJ m 0.867 0.153   3 0.0882 0.176 0.7, 1.0 -1.03
BXD40/TyJ m 2.22 0.915   5 0.409 0.412 1.3, 3.3 -0.03
BXD42/TyJ m 3.06 1.29   5 0.578 0.423 1.5, 4.5 0.59
BXD43/RwwJ m 5.25 4.07   4 2.03 0.775 2.2, 11.1 2.21
BXD44/RwwJ m 1.4 0.0   2   0.0 0.0 1.4, 1.4 -0.64
BXD45/RwwJ m 1.15 0.0707   2   0.05 0.0615 1.1, 1.2 -0.82
BXD48a/RwwJ m 1.05 0.342   4 0.171 0.325 0.6, 1.4 -0.9
BXD49/RwwJ m 0.6 0.424   2   0.3 0.707 0.3, 0.9 -1.23
BXD50/RwwJ m 1.3 0.455   4 0.227 0.35 0.7, 1.7 -0.71
BXD51/RwwJ m 2.57 2.64   3 1.52 1.03 0.4, 5.5 0.23
BXD55/RwwJ m 1.7 0.436   3 0.252 0.256 1.2, 2.0 -0.42
BXD56/RwwJ m 0.55 0.0707   2   0.05 0.129 0.5, 0.6 -1.27
BXD60/RwwJ m 2.05 2.19   2   1.55 1.07 0.5, 3.6 -0.16
BXD61/RwwJ m 1.83 1.24   3 0.717 0.678 0.4, 2.6 -0.32
BXD62/RwwJ m 0.9 0.612   5 0.274 0.68 0.3, 1.7 -1.01
BXD65/RwwJ m 2.6 0.849   2   0.6 0.326 2.0, 3.2 0.25
BXD66/RwwJ m 6.6 3.11   2   2.2 0.471 4.4, 8.8 3.21
BXD68/RwwJ m 3.23 1.98   6 0.81 0.613 0.5, 6.2 0.72
BXD70/RwwJ m 1.1 0.4   3 0.231 0.364 0.7, 1.5 -0.86
BXD71/RwwJ m 2.45 1.58   4 0.792 0.647 0.2, 3.9 0.14
BXD73a/RwwJ m 1.04 0.723   5 0.323 0.695 0.1, 2.0 -0.91
BXD73b/RwwJ m 1.77 1.65   4 0.825 0.93 0.2, 4.1 -0.36
BXD73/RwwJ m 1.95 1.34   2   0.95 0.689 1.0, 2.9 -0.23
BXD75/RwwJ m 4.02 4.35   5 1.95 1.08 1.4, 11.7 1.3
BXD77/RwwJ m 1.7 1.84   2   1.3 1.08 0.4, 3.0 -0.42
BXD83/RwwJ m 1.62 1.18   4 0.588 0.724 0.3, 3.0 -0.48
BXD84/RwwJ m 1.17 0.702   3 0.406 0.602 0.5, 1.9 -0.81
BXD85/RwwJ m 2.36 1.98   5 0.884 0.838 0.7, 5.3 0.07
BXD86/RwwJ m 2.62 1.35   4 0.675 0.514 1.0, 4.3 0.26
BXD89/RwwJ m 1.53 0.404   3 0.233 0.264 1.3, 2.0 -0.54
BXD90/RwwJ m 1.65 0.495   2   0.35 0.3 1.3, 2.0 -0.45
BXD95/RwwJ m 3.1 1.56   2   1.1 0.502 2.0, 4.2 0.62
BXD98/RwwJ m 3.0 2.12   2   1.5 0.707 1.5, 4.5 0.55
C57BL/6J m 3.2 1.66   5 0.744 0.52 1.4, 5.8 0.69
DBA/2J m 4.22 2.89   4 1.45 0.685 0.7, 7.3 1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100/RwwJ m 2.32 0.8375 3.9777 0.6623
BXD102/RwwJ m 2.7 0.8375 4.3577 1.0423
BXD12/TyJ m 1.15 1.3242 3.7711 0.0
BXD13/TyJ m 2.2 1.3242 4.8211 0.0
BXD14/TyJ m 1.2 1.3242 3.8211 0.0
BXD16/TyJ m 6.8 1.3242 9.4211 4.1789
BXD18/TyJ m 0.85 1.3242 3.4711 0.0
BXD1/TyJ m 3.62 0.8375 5.2777 1.9623
BXD22/TyJ m 1.75 1.3242 4.3711 0.0
BXD24/TyJ m 1.7 0.8375 3.3577 0.0423
BXD25/TyJ m 2.25 1.3242 4.8711 0.0
BXD29-Tlr4lps-2J/J m 2.85 1.3242 5.4711 0.2289
BXD2/TyJ m 1.1 1.3242 3.7211 0.0
BXD31/TyJ m 2.75 0.9363 4.6034 0.8966
BXD32/TyJ m 4.325 0.9363 6.1784 2.4716
BXD34/TyJ m 1.85 0.7645 3.3633 0.3367
BXD36/TyJ m 1.0 1.3242 3.6211 0.0
BXD38/TyJ m 2.075 0.9363 3.9284 0.2216
BXD39/TyJ m 0.8667 1.0812 3.0068 0.0
BXD40/TyJ m 2.22 0.8375 3.8777 0.5623
BXD42/TyJ m 3.06 0.8375 4.7177 1.4023
BXD43/RwwJ m 5.25 0.9363 7.1034 3.3966
BXD44/RwwJ m 1.4 1.3242 4.0211 0.0
BXD45/RwwJ m 1.15 1.3242 3.7711 0.0
BXD48a/RwwJ m 1.05 0.9363 2.9034 0.0
BXD49/RwwJ m 0.6 1.3242 3.2211 0.0
BXD50/RwwJ m 1.3 0.9363 3.1534 0.0
BXD51/RwwJ m 2.5667 1.0812 4.7068 0.4265
BXD55/RwwJ m 1.7 1.0812 3.8401 0.0
BXD56/RwwJ m 0.55 1.3242 3.1711 0.0
BXD60/RwwJ m 2.05 1.3242 4.6711 0.0
BXD61/RwwJ m 1.8333 1.0812 3.9735 0.0
BXD62/RwwJ m 0.9 0.8375 2.5577 0.0
BXD65/RwwJ m 2.6 1.3242 5.2211 0.0
BXD66/RwwJ m 6.6 1.3242 9.2211 3.9789
BXD68/RwwJ m 3.2333 0.7645 4.7466 1.72
BXD70/RwwJ m 1.1 1.0812 3.2401 0.0
BXD71/RwwJ m 2.45 0.9363 4.3034 0.5966
BXD73a/RwwJ m 1.04 0.8375 2.6977 0.0
BXD73b/RwwJ m 1.775 0.9363 3.6284 0.0
BXD73/RwwJ m 1.95 1.3242 4.5711 0.0
BXD75/RwwJ m 4.02 0.8375 5.6777 2.3623
BXD77/RwwJ m 1.7 1.3242 4.3211 0.0
BXD83/RwwJ m 1.625 0.9363 3.4784 0.0
BXD84/RwwJ m 1.1667 1.0812 3.3068 0.0
BXD85/RwwJ m 2.36 0.8375 4.0177 0.7023
BXD86/RwwJ m 2.625 0.9363 4.4784 0.7716
BXD89/RwwJ m 1.5333 1.0812 3.6735 0.0
BXD90/RwwJ m 1.65 1.3242 4.2711 0.0
BXD95/RwwJ m 3.1 1.3242 5.7211 0.4789
BXD98/RwwJ m 3.0 1.3242 5.6211 0.3789
C57BL/6J m 3.2 0.8375 4.8577 1.5423
DBA/2J m 4.225 0.9363 6.0784 2.3716




  GWAS USING LINEAR MIXED MODELS