Project measure / variable:   Harrill1   pct_spleen_trt

ID, description, units MPD:39514   pct_spleen_trt   spleen weight as percentage of body weight   [%]  isoniazid  
isoniazid study
Data set, strains Harrill1   inbred   33 strains     sex: f     age: 8-10wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Harrill1 - spleen weight as percentage of body weight isoniazid



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested33 strains
Mean of the strain means0.302   %
Median of the strain means0.283   %
SD of the strain means± 0.0974
Coefficient of variation (CV)0.322
Min–max range of strain means0.110   –   0.510   %
Mean sample size per strain3.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 31 0.9216 0.0297 13.3665 < 0.0001
Residuals 83 0.1846 0.0022


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.218 0.0411   4 0.0206 0.189 0.18, 0.27 -0.87
A/J f 0.195 0.0212   2   0.015 0.109 0.18, 0.21 -1.1
AKR/J f 0.268 0.0206   4 0.0103 0.0771 0.25, 0.29 -0.35
BALB/cJ f 0.318 0.0602   4 0.0301 0.19 0.26, 0.4 0.16
BTBR T+ Itpr3tf/J f 0.245 0.0252   4 0.0126 0.103 0.21, 0.27 -0.59
BUB/BnJ f 0.467 0.0263   4 0.0131 0.0563 0.44, 0.49 1.69
C3H/HeJ f 0.455 0.0819   4 0.0409 0.18 0.34, 0.53 1.57
C57BL/6J f 0.28 0.0141   4 0.00707 0.0505 0.26, 0.29 -0.23
C57BLKS/J f 0.333 0.0435   4 0.0217 0.131 0.27, 0.37 0.31
C57BR/cdJ f 0.302 0.0457   4 0.0229 0.151 0.25, 0.35 0.0
C58/J f 0.455 0.0661   4 0.033 0.145 0.41, 0.55 1.57
CBA/J f 0.287 0.0171   4 0.00854 0.0594 0.27, 0.31 -0.16
CE/J f 0.2 0.0245   4 0.0122 0.122 0.18, 0.23 -1.05
DBA/2J f 0.365 0.0129   4 0.00645 0.0354 0.35, 0.38 0.64
FVB/NJ f 0.398 0.0538   4 0.0269 0.135 0.33, 0.46 0.98
I/LnJ f 0.38 0.0294   4 0.0147 0.0775 0.35, 0.42 0.8
KK/HlJ f 0.305 0.01   4 0.005 0.0328 0.29, 0.31 0.03
LG/J f 0.277 0.0115   3 0.00667 0.0417 0.27, 0.29 -0.26
LP/J f 0.183 0.0208   3 0.012 0.114 0.16, 0.2 -1.23
MA/MyJ f 0.17 0.0283   2   0.02 0.166 0.15, 0.19 -1.36
MRL/MpJ f 0.26 0.0408   4 0.0204 0.157 0.23, 0.32 -0.44
NOD/ShiLtJ f 0.34 0.0821   4 0.041 0.241 0.26, 0.45 0.39
NON/ShiLtJ f 0.34 0.0755   3 0.0436 0.222 0.26, 0.41 0.39
NOR/LtJ f 0.278 0.034   4 0.017 0.123 0.23, 0.31 -0.25
NZW/LacJ f 0.283 0.0386   4 0.0193 0.137 0.23, 0.32 -0.2
PL/J f 0.2 0.0436   3 0.0252 0.218 0.17, 0.25 -1.05
PWK/PhJ f 0.21 0.0583   4 0.0292 0.278 0.13, 0.27 -0.95
RIIIS/J f 0.237 0.0306   3 0.0176 0.129 0.21, 0.27 -0.67
SEA/GnJ f 0.435 0.00707   2   0.005 0.0163 0.43, 0.44 1.36
SJL/J f 0.51 0.0829   4 0.0414 0.162 0.45, 0.63 2.13
SM/J f 0.255 0.00707   2   0.005 0.0277 0.25, 0.26 -0.49
SWR/J f 0.42 0.0804   4 0.0402 0.191 0.36, 0.53 1.21
WSB/EiJ f 0.11 0.0   1   0.0 0.0 0.11, 0.11 -1.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.2175 0.0236 0.2644 0.1706
A/J f 0.195 0.0333 0.2613 0.1287
AKR/J f 0.2675 0.0236 0.3144 0.2206
BALB/cJ f 0.3175 0.0236 0.3644 0.2706
BTBR T+ Itpr3tf/J f 0.245 0.0236 0.2919 0.1981
BUB/BnJ f 0.4675 0.0236 0.5144 0.4206
C3H/HeJ f 0.455 0.0236 0.5019 0.4081
C57BL/6J f 0.28 0.0236 0.3269 0.2331
C57BLKS/J f 0.3325 0.0236 0.3794 0.2856
C57BR/cdJ f 0.3025 0.0236 0.3494 0.2556
C58/J f 0.455 0.0236 0.5019 0.4081
CBA/J f 0.2875 0.0236 0.3344 0.2406
CE/J f 0.2 0.0236 0.2469 0.1531
DBA/2J f 0.365 0.0236 0.4119 0.3181
FVB/NJ f 0.3975 0.0236 0.4444 0.3506
I/LnJ f 0.38 0.0236 0.4269 0.3331
KK/HlJ f 0.305 0.0236 0.3519 0.2581
LG/J f 0.2767 0.0272 0.3308 0.2225
LP/J f 0.1833 0.0272 0.2375 0.1292
MA/MyJ f 0.17 0.0333 0.2363 0.1037
MRL/MpJ f 0.26 0.0236 0.3069 0.2131
NOD/ShiLtJ f 0.34 0.0236 0.3869 0.2931
NON/ShiLtJ f 0.34 0.0272 0.3942 0.2858
NOR/LtJ f 0.2775 0.0236 0.3244 0.2306
NZW/LacJ f 0.2825 0.0236 0.3294 0.2356
PL/J f 0.2 0.0272 0.2542 0.1458
PWK/PhJ f 0.21 0.0236 0.2569 0.1631
RIIIS/J f 0.2367 0.0272 0.2908 0.1825
SEA/GnJ f 0.435 0.0333 0.5013 0.3687
SJL/J f 0.51 0.0236 0.5569 0.4631
SM/J f 0.255 0.0333 0.3213 0.1887
SWR/J f 0.42 0.0236 0.4669 0.3731




  GWAS USING LINEAR MIXED MODELS