Project measure / variable:   Harrill1   bw_d4_ctrl

ID, description, units MPD:39503   bw_d4_ctrl   body weight day 4   [g]  control  
isoniazid study
Data set, strains Harrill1   inbred   33 strains     sex: f     age: 8-10wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Harrill1 - body weight day 4 control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested33 strains
Mean of the strain means19.2   g
Median of the strain means18.7   g
SD of the strain means± 4.57
Coefficient of variation (CV)0.238
Min–max range of strain means9.25   –   30.7   g
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 32 2671.9248 83.4977 34.7576 < 0.0001
Residuals 98 235.4242 2.4023


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 18.2 1.29   4 0.645 0.0707 16.7, 19.5 -0.21
A/J f 18.7 0.568   4 0.284 0.0304 18.1, 19.3 -0.1
AKR/J f 22.7 3.12   4 1.56 0.137 18.8, 26.2 0.77
BALB/cJ f 19.9 0.946   4 0.473 0.0476 18.7, 20.9 0.16
BTBR T+ Itpr3tf/J f 23.8 1.32   4 0.66 0.0555 22.7, 25.7 1.01
BUB/BnJ f 20.9 2.13   4 1.06 0.102 18.3, 23.3 0.38
C3H/HeJ f 18.0 0.775   4 0.387 0.043 16.9, 18.7 -0.26
C57BL/6J f 17.2 0.05   4 0.025 0.0029 17.2, 17.3 -0.43
C57BLKS/J f 18.0 0.96   4 0.48 0.0533 17.2, 19.4 -0.26
C57BR/cdJ f 19.5 1.77   4 0.884 0.0907 17.3, 21.6 0.07
C58/J f 14.7 1.41   4 0.703 0.0958 12.6, 15.7 -0.98
CBA/J f 20.2 1.27   4 0.633 0.0625 19.0, 21.7 0.22
CE/J f 19.4 1.71   4 0.857 0.0882 17.2, 21.2 0.05
DBA/2J f 17.1 0.67   4 0.335 0.0393 16.4, 17.7 -0.45
FVB/NJ f 18.1 1.47   4 0.734 0.0811 16.5, 20.0 -0.24
I/LnJ f 18.0 2.4   3 1.39 0.133 15.7, 20.5 -0.26
KK/HlJ f 27.5 2.5   4 1.25 0.0907 24.9, 29.9 1.82
LG/J f 28.7 2.68   4 1.34 0.0935 25.9, 32.1 2.08
LP/J f 15.2 0.404   4 0.202 0.0265 14.9, 15.8 -0.87
MA/MyJ f 18.1 1.24   4 0.619 0.0684 17.0, 19.8 -0.24
MRL/MpJ f 30.7 2.39   4 1.19 0.0777 29.4, 34.3 2.52
NOD/ShiLtJ f 20.2 1.09   4 0.544 0.0539 18.6, 21.1 0.22
NON/ShiLtJ f 19.9 0.492   4 0.246 0.0248 19.4, 20.3 0.16
NOR/LtJ f 20.5 1.56   4 0.782 0.0764 18.3, 22.0 0.29
NZW/LacJ f 26.4 2.6   4 1.3 0.0985 23.5, 29.8 1.58
PL/J f 17.3 0.763   4 0.382 0.0442 16.2, 18.0 -0.41
PWK/PhJ f 11.2 0.608   4 0.304 0.0541 10.7, 12.1 -1.75
RIIIS/J f 14.5 1.9   4 0.952 0.131 11.7, 15.7 -1.02
SEA/GnJ f 20.1 1.43   4 0.717 0.0712 18.5, 21.4 0.2
SJL/J f 19.5 1.62   4 0.81 0.0833 17.6, 21.0 0.07
SM/J f 13.8 0.25   4 0.125 0.0181 13.5, 14.1 -1.18
SWR/J f 15.6 0.698   4 0.349 0.0447 15.0, 16.5 -0.78
WSB/EiJ f 9.25 0.866   4 0.433 0.0936 8.2, 10.1 -2.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 18.25 0.775 19.7879 16.7121
A/J f 18.675 0.775 20.2129 17.1371
AKR/J f 22.7 0.775 24.2379 21.1621
BALB/cJ f 19.875 0.775 21.4129 18.3371
BTBR T+ Itpr3tf/J f 23.775 0.775 25.3129 22.2371
BUB/BnJ f 20.95 0.775 22.4879 19.4121
C3H/HeJ f 18.0 0.775 19.5379 16.4621
C57BL/6J f 17.225 0.775 18.7629 15.6871
C57BLKS/J f 18.025 0.775 19.5629 16.4871
C57BR/cdJ f 19.5 0.775 21.0379 17.9621
C58/J f 14.675 0.775 16.2129 13.1371
CBA/J f 20.25 0.775 21.7879 18.7121
CE/J f 19.425 0.775 20.9629 17.8871
DBA/2J f 17.075 0.775 18.6129 15.5371
FVB/NJ f 18.1 0.775 19.6379 16.5621
I/LnJ f 18.0333 0.8949 19.8091 16.2575
KK/HlJ f 27.525 0.775 29.0629 25.9871
LG/J f 28.7 0.775 30.2379 27.1621
LP/J f 15.25 0.775 16.7879 13.7121
MA/MyJ f 18.1 0.775 19.6379 16.5621
MRL/MpJ f 30.725 0.775 32.2629 29.1871
NOD/ShiLtJ f 20.175 0.775 21.7129 18.6371
NON/ShiLtJ f 19.875 0.775 21.4129 18.3371
NOR/LtJ f 20.475 0.775 22.0129 18.9371
NZW/LacJ f 26.375 0.775 27.9129 24.8371
PL/J f 17.275 0.775 18.8129 15.7371
PWK/PhJ f 11.225 0.775 12.7629 9.6871
RIIIS/J f 14.5 0.775 16.0379 12.9621
SEA/GnJ f 20.15 0.775 21.6879 18.6121
SJL/J f 19.45 0.775 20.9879 17.9121
SM/J f 13.825 0.775 15.3629 12.2871
SWR/J f 15.6 0.775 17.1379 14.0621
WSB/EiJ f 9.25 0.775 10.7879 7.7121




  GWAS USING LINEAR MIXED MODELS