Project measure / variable:   Crowley1   horizontal_actd120

ID, description, units MPD:39415   horizontal_actd120   distance traveled, 60 min test   [cm]  on day 120  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   26 strains     sex: m     age: 9-28wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crowley1 - distance traveled, 60 min test on day 120



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested26 strains
Mean of the strain means4134   cm
Median of the strain means3353   cm
SD of the strain means± 2952
Coefficient of variation (CV)0.714
Min–max range of strain means404   –   11768   cm
Mean sample size per strain5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 25 1232458756.81 49298350.2724 11.2193 < 0.0001
Residuals 122 536074751.0008 4394055.3361


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 963.0 661.0   8 234.0 0.687 155.0, 2369.0 -1.07
A/J m 617.0 261.0   5 117.0 0.423 260.0, 992.0 -1.19
AKR/J m 6146.0 4735.0   5 2118.0 0.77 1914.0, 11968.0 0.68
BALB/cByJ m 3980.0 5454.0   4 2727.0 1.37 895.0, 12144.0 -0.05
BTBR T+ Itpr3tf/J m 2930.0 590.0   8 209.0 0.201 2340.0, 3959.0 -0.41
C3H/HeJ m 2361.0 917.0   4 458.0 0.388 1746.0, 3723.0 -0.6
C57BL/6J m 4246.0 1401.0   5 627.0 0.33 2305.0, 5945.0 0.04
C57BLKS/J m 1492.0 705.0   5 315.0 0.472 754.0, 2435.0 -0.89
CAST/EiJ m 11768.0 2511.0   5 1123.0 0.213 8532.0, 15427.0 2.59
CBA/J m 2589.0 524.0   5 234.0 0.202 1842.0, 3189.0 -0.52
DBA/2J m 6421.0 1866.0   9 622.0 0.291 4005.0, 9792.0 0.77
DDY/JclSidSeyFrkJ m 3231.0 2643.0   7 999.0 0.818 486.0, 8029.0 -0.31
FVB/NJ m 8426.0 2107.0   5 942.0 0.25 5915.0, 10762.0 1.45
KK/HlJ m 2536.0 1643.0   7 621.0 0.648 993.0, 5771.0 -0.54
MA/MyJ m 6221.0 1907.0   6 779.0 0.307 3184.0, 8574.0 0.71
MOLF/EiJ m 2345.0 788.0   5 352.0 0.336 1048.0, 2923.0 -0.61
MRL/MpJ m 2617.0 1454.0   5 650.0 0.556 997.0, 4892.0 -0.51
MSM/MsJ m 5147.0 3756.0   5 1680.0 0.73 999.0, 11022.0 0.34
NOD/ShiLtJ m 8377.0 2111.0   5 944.0 0.252 6265.0, 11246.0 1.44
NON/ShiLtJ m 4144.0 2450.0   7 926.0 0.591 930.0, 7136.0 0.0
NZL/LtJ m 1049.0 459.0   7 173.0 0.438 188.0, 1580.0 -1.04
NZO/HlLtJ m 404.0 146.0   4 73.0 0.362 215.0, 526.0 -1.26
NZW/LacJ m 853.0 302.0   5 135.0 0.354 508.0, 1210.0 -1.11
PWK/PhJ m 5996.0 3769.0   5 1686.0 0.629 1511.0, 11940.0 0.63
SJL/J m 3475.0 672.0   4 336.0 0.193 2831.0, 4132.0 -0.22
SM/J m 9148.0 1178.0   8 417.0 0.129 7461.0, 11085.0 1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 962.875 741.1187 2429.9935 0.0
A/J m 616.8 937.4492 2472.5744 0.0
AKR/J m 6146.0 937.4492 8001.7744 4290.2256
BALB/cByJ m 3979.75 1048.1001 6054.5688 1904.9312
BTBR T+ Itpr3tf/J m 2930.375 741.1187 4397.4935 1463.2565
C3H/HeJ m 2361.0 1048.1001 4435.8188 286.1812
C57BL/6J m 4246.4 937.4492 6102.1744 2390.6256
C57BLKS/J m 1491.6 937.4492 3347.3744 0.0
CAST/EiJ m 11768.0 937.4492 13623.7744 9912.2256
CBA/J m 2589.2 937.4492 4444.9744 733.4256
DBA/2J m 6420.8889 698.7334 7804.1015 5037.6763
DDY/JclSidSeyFrkJ m 3231.4286 792.2892 4799.8442 1663.0129
FVB/NJ m 8426.0 937.4492 10281.7744 6570.2256
KK/HlJ m 2536.2857 792.2892 4104.7013 967.8701
MA/MyJ m 6221.1667 855.7702 7915.2492 4527.0842
MOLF/EiJ m 2345.2 937.4492 4200.9744 489.4256
MRL/MpJ m 2616.6 937.4492 4472.3744 760.8256
MSM/MsJ m 5147.2 937.4492 7002.9744 3291.4256
NOD/ShiLtJ m 8376.8 937.4492 10232.5744 6521.0256
NON/ShiLtJ m 4143.7143 792.2892 5712.1299 2575.2987
NZL/LtJ m 1049.1429 792.2892 2617.5585 0.0
NZO/HlLtJ m 403.75 1048.1001 2478.5688 0.0
NZW/LacJ m 852.8 937.4492 2708.5744 0.0
PWK/PhJ m 5995.6 937.4492 7851.3744 4139.8256
SJL/J m 3475.0 1048.1001 5549.8188 1400.1812
SM/J m 9148.0 741.1187 10615.1185 7680.8815




  GWAS USING LINEAR MIXED MODELS