Project measure / variable:   Crowley1   horizontal_actd0

ID, description, units MPD:39412   horizontal_actd0   distance traveled, 60 min test   [cm]  on day 0  
haloperidol study
Data set, strains Crowley1   inbred w/CC8   27 strains     sex: m     age: 9-28wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crowley1 - distance traveled, 60 min test on day 0



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means5663   cm
Median of the strain means5583   cm
SD of the strain means± 2949
Coefficient of variation (CV)0.521
Min–max range of strain means1298   –   11338   cm
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 26 1319269172.7154 50741122.0275 15.8528 < 0.0001
Residuals 132 422502140.1274 3200773.7888


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2193.0 1437.0   8 508.0 0.655 89.0, 4906.0 -1.18
A/J m 1298.0 1374.0   5 614.0 1.06 141.0, 3586.0 -1.48
AKR/J m 7497.0 2886.0   5 1291.0 0.385 2864.0, 9870.0 0.62
BALB/cByJ m 5805.0 4869.0   5 2178.0 0.839 2497.0, 14157.0 0.05
BTBR T+ Itpr3tf/J m 5782.0 2524.0   8 892.0 0.437 1587.0, 9683.0 0.04
C3H/HeJ m 2603.0 439.0   5 196.0 0.169 2033.0, 3092.0 -1.04
C57BL/6J m 7370.0 896.0   5 401.0 0.122 6543.0, 8810.0 0.58
C57BLKS/J m 3645.0 807.0   5 361.0 0.221 2608.0, 4707.0 -0.68
CAST/EiJ m 10677.0 2322.0   5 1038.0 0.217 7690.0, 14039.0 1.7
CBA/J m 3269.0 1013.0   5 453.0 0.31 2117.0, 4706.0 -0.81
DBA/2J m 6686.0 1974.0   9 658.0 0.295 3942.0, 11305.0 0.35
DDY/JclSidSeyFrkJ m 4175.0 1160.0   7 438.0 0.278 2384.0, 5269.0 -0.5
FVB/NJ m 9659.0 2713.0   5 1213.0 0.281 6637.0, 13606.0 1.36
KK/HlJ m 3838.0 1098.0   7 415.0 0.286 2386.0, 5966.0 -0.62
MA/MyJ m 11310.0 1615.0   6 659.0 0.143 8276.0, 12853.0 1.91
MOLF/EiJ m 3893.0 1317.0   5 589.0 0.338 2061.0, 5296.0 -0.6
MRL/MpJ m 5583.0 730.0   5 326.0 0.131 4595.0, 6646.0 -0.03
MSM/MsJ m 2898.0 1173.0   6 479.0 0.405 839.0, 4094.0 -0.94
NOD/ShiLtJ m 7971.0 1511.0   5 676.0 0.19 6755.0, 10308.0 0.78
NON/ShiLtJ m 7792.0 1233.0   8 436.0 0.158 5330.0, 9242.0 0.72
NZL/LtJ m 4470.0 846.0   8 299.0 0.189 3727.0, 6129.0 -0.4
NZO/HlLtJ m 1725.0 612.0   4 306.0 0.355 1370.0, 2637.0 -1.34
NZW/LacJ m 3444.0 1055.0   5 472.0 0.306 1667.0, 4264.0 -0.75
PWK/PhJ m 8311.0 2218.0   5 992.0 0.267 5192.0, 11332.0 0.9
SJL/J m 2981.0 1524.0   5 681.0 0.511 1728.0, 5406.0 -0.91
SM/J m 11338.0 1507.0   8 533.0 0.133 9128.0, 13131.0 1.92
WSB/EiJ m 6684.0 1961.0   5 877.0 0.293 4174.0, 8867.0 0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2193.25 632.532 3444.4608 942.0392
A/J m 1298.2 800.0967 2880.8704 0.0
AKR/J m 7497.2 800.0967 9079.8704 5914.5296
BALB/cByJ m 5804.8 800.0967 7387.4704 4222.1296
BTBR T+ Itpr3tf/J m 5781.875 632.532 7033.0858 4530.6642
C3H/HeJ m 2602.8 800.0967 4185.4704 1020.1296
C57BL/6J m 7370.0 800.0967 8952.6704 5787.3296
C57BLKS/J m 3644.6 800.0967 5227.2704 2061.9296
CAST/EiJ m 10677.2 800.0967 12259.8704 9094.5296
CBA/J m 3268.6 800.0967 4851.2704 1685.9296
DBA/2J m 6685.6667 596.3569 7865.3195 5506.0138
DDY/JclSidSeyFrkJ m 4175.2857 676.2051 5512.8863 2837.6851
FVB/NJ m 9659.4 800.0967 11242.0704 8076.7296
KK/HlJ m 3837.8571 676.2051 5175.4578 2500.2565
MA/MyJ m 11309.8333 730.385 12754.6071 9865.0595
MOLF/EiJ m 3893.0 800.0967 5475.6704 2310.3296
MRL/MpJ m 5583.2 800.0967 7165.8704 4000.5296
MSM/MsJ m 2898.3333 730.385 4343.1071 1453.5595
NOD/ShiLtJ m 7971.0 800.0967 9553.6704 6388.3296
NON/ShiLtJ m 7792.0 632.532 9043.2108 6540.7892
NZL/LtJ m 4470.125 632.532 5721.3358 3218.9142
NZO/HlLtJ m 1725.25 894.5353 3494.7293 0.0
NZW/LacJ m 3444.2 800.0967 5026.8704 1861.5296
PWK/PhJ m 8310.8 800.0967 9893.4704 6728.1296
SJL/J m 2981.0 800.0967 4563.6704 1398.3296
SM/J m 11338.125 632.532 12589.3358 10086.9142
WSB/EiJ m 6684.2 800.0967 8266.8704 5101.5296




  GWAS USING LINEAR MIXED MODELS