Project measure / variable:   Wiltshire2   OFT_dist_cont

ID, description, units MPD:38005   OFT_dist_cont   OFT distance traveled, 10 min test   [cm]  control  
fluoxetine study
Data set, strains Wiltshire2   inbred   30 strains     sex: m     age: 10-11wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Wiltshire2 - OFT distance traveled, 10 min test control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested30 strains
Mean of the strain means1531   cm
Median of the strain means1576   cm
SD of the strain means± 602
Coefficient of variation (CV)0.393
Min–max range of strain means258   –   2669   cm
Mean sample size per strain10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 29 116659302.8291 4022734.5803 23.1919 < 0.0001
Residuals 295 51169079.728 173454.5076


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 450.0 381.0   15 98.5 0.847 33.0, 1079.0 -1.79
A/J m 258.0 205.0   12 59.2 0.796 33.2, 590.0 -2.11
AKR/J m 1905.0 520.0   9 173.0 0.273 1394.0, 2956.0 0.62
BALB/cJ m 969.0 805.0   9 268.0 0.831 32.6, 2127.0 -0.93
BTBR T+ Itpr3tf/J m 1910.0 578.0   9 193.0 0.303 1175.0, 2931.0 0.63
BUB/BnJ m 1607.0 411.0   8 145.0 0.256 1121.0, 2276.0 0.13
C3H/HeJ m 1104.0 235.0   15 60.7 0.213 768.0, 1572.0 -0.71
C57BL/6J m 1128.0 258.0   12 74.6 0.229 680.0, 1469.0 -0.67
C57BLKS/J m 775.0 246.0   10 77.7 0.317 303.0, 1210.0 -1.26
C57BR/cdJ m 2134.0 426.0   15 110.0 0.199 1624.0, 2878.0 1.0
C58/J m 1998.0 720.0   9 240.0 0.36 1227.0, 3674.0 0.78
CBA/J m 1051.0 412.0   15 106.0 0.392 469.0, 1863.0 -0.8
CE/J m 1546.0 355.0   9 118.0 0.23 904.0, 2136.0 0.03
DBA/2J m 1085.0 358.0   18 84.4 0.33 71.5, 1717.0 -0.74
FVB/NJ m 2209.0 445.0   9 148.0 0.201 1535.0, 2795.0 1.13
I/LnJ m 2065.0 413.0   11 124.0 0.2 1238.0, 2778.0 0.89
LG/J m 1677.0 325.0   11 97.9 0.194 965.0, 2091.0 0.24
LP/J m 1011.0 586.0   9 195.0 0.58 557.0, 2145.0 -0.86
MA/MyJ m 2349.0 549.0   9 183.0 0.234 1589.0, 3549.0 1.36
MRL/MpJ m 1472.0 224.0   11 67.6 0.152 1242.0, 1835.0 -0.1
NOD/ShiLtJ m 2669.0 762.0   11 230.0 0.285 1400.0, 3976.0 1.89
NOR/LtJ m 2411.0 511.0   8 181.0 0.212 1457.0, 3141.0 1.46
NZB/BlNJ m 1070.0 209.0   11 63.0 0.195 663.0, 1343.0 -0.77
NZW/LacJ m 1078.0 164.0   9 54.6 0.152 743.0, 1266.0 -0.75
P/J m 1807.0 170.0   9 56.5 0.0938 1607.0, 2149.0 0.46
PL/J m 1798.0 369.0   12 106.0 0.205 1326.0, 2521.0 0.44
RIIIS/J m 2051.0 301.0   9 100.0 0.147 1536.0, 2445.0 0.86
SJL/J m 945.0 352.0   11 106.0 0.373 461.0, 1671.0 -0.97
SM/J m 1999.0 203.0   8 71.9 0.102 1714.0, 2222.0 0.78
SWR/J m 1394.0 288.0   12 83.0 0.206 1095.0, 1867.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 450.18 107.5343 661.8117 238.5483
A/J m 257.575 120.227 494.1864 20.9636
AKR/J m 1905.1111 138.8262 2178.3264 1631.8958
BALB/cJ m 968.7333 138.8262 1241.9487 695.518
BTBR T+ Itpr3tf/J m 1909.6667 138.8262 2182.882 1636.4513
BUB/BnJ m 1607.0 147.2475 1896.7886 1317.2114
C3H/HeJ m 1104.2 107.5343 1315.8317 892.5683
C57BL/6J m 1128.4167 120.227 1365.0281 891.8053
C57BLKS/J m 775.1 131.7021 1034.2948 515.9052
C57BR/cdJ m 2134.2667 107.5343 2345.8983 1922.635
C58/J m 1998.1111 138.8262 2271.3264 1724.8958
CBA/J m 1051.1333 107.5343 1262.765 839.5017
CE/J m 1546.2222 138.8262 1819.4375 1273.0069
DBA/2J m 1085.4722 98.165 1278.6646 892.2798
FVB/NJ m 2209.2222 138.8262 2482.4375 1936.0069
I/LnJ m 2065.2727 125.5731 2312.4053 1818.1402
LG/J m 1677.0909 125.5731 1924.2235 1429.9584
LP/J m 1011.1111 138.8262 1284.3264 737.8958
MA/MyJ m 2349.1111 138.8262 2622.3264 2075.8958
MRL/MpJ m 1471.7273 125.5731 1718.8598 1224.5947
NOD/ShiLtJ m 2669.3636 125.5731 2916.4962 2422.2311
NOR/LtJ m 2410.625 147.2475 2700.4136 2120.8364
NZB/BlNJ m 1070.1818 125.5731 1317.3144 823.0493
NZW/LacJ m 1078.4444 138.8262 1351.6598 805.2291
P/J m 1807.3333 138.8262 2080.5487 1534.118
PL/J m 1797.5 120.227 2034.1114 1560.8886
RIIIS/J m 2050.7778 138.8262 2323.9931 1777.5625
SJL/J m 945.1818 125.5731 1192.3144 698.0493
SM/J m 1999.375 147.2475 2289.1636 1709.5864
SWR/J m 1393.5833 120.227 1630.1947 1156.9719




  GWAS USING LINEAR MIXED MODELS