Project measure / variable:   Wiltshire2   OFT_dist_cont

ID, description, units MPD:38005   OFT_dist_cont   OFT distance traveled, 10 min test   [cm]  control  
fluoxetine study
Data set, strains Wiltshire2   inbred   30 strains     sex: m     age: 10-11wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Wiltshire2 - OFT distance traveled, 10 min test control

NOD/ShiLtJNOR/LtJMA/MyJFVB/NJC57BR/cdJI/LnJRIIIS/JSM/JC58/JBTBR T<+> Itpr3<tf>/JAKR/JP/JPL/JLG/JBUB/BnJCE/JMRL/MpJSWR/JC57BL/6JC3H/HeJDBA/2JNZW/LacJNZB/BlNJCBA/JLP/JBALB/cJSJL/JC57BLKS/J129S1/SvImJA/J cm 05001,0001,5002,0002,5003,0003,5004,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested30 strains
Mean of the strain means1531   cm
Median of the strain means1576   cm
SD of the strain means± 602
Coefficient of variation (CV)0.393
Min–max range of strain means258   –   2669   cm
Mean sample size per strain10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 29 116659302.8291 4022734.5803 23.1919 < 0.0001
Residuals 295 51169079.728 173454.5076


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 30 (30)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 450.0 381.0   15 98.5 0.847 33.0, 1079.0 -1.79
A/J m 258.0 205.0   12 59.2 0.796 33.2, 590.0 -2.11
AKR/J m 1905.0 520.0   9 173.0 0.273 1394.0, 2956.0 0.62
BALB/cJ m 969.0 805.0   9 268.0 0.831 32.6, 2127.0 -0.93
BTBR T+ Itpr3tf/J m 1910.0 578.0   9 193.0 0.303 1175.0, 2931.0 0.63
BUB/BnJ m 1607.0 411.0   8 145.0 0.256 1121.0, 2276.0 0.13
C3H/HeJ m 1104.0 235.0   15 60.7 0.213 768.0, 1572.0 -0.71
C57BL/6J m 1128.0 258.0   12 74.6 0.229 680.0, 1469.0 -0.67
C57BLKS/J m 775.0 246.0   10 77.7 0.317 303.0, 1210.0 -1.26
C57BR/cdJ m 2134.0 426.0   15 110.0 0.199 1624.0, 2878.0 1.0
C58/J m 1998.0 720.0   9 240.0 0.36 1227.0, 3674.0 0.78
CBA/J m 1051.0 412.0   15 106.0 0.392 469.0, 1863.0 -0.8
CE/J m 1546.0 355.0   9 118.0 0.23 904.0, 2136.0 0.03
DBA/2J m 1085.0 358.0   18 84.4 0.33 71.5, 1717.0 -0.74
FVB/NJ m 2209.0 445.0   9 148.0 0.201 1535.0, 2795.0 1.13
I/LnJ m 2065.0 413.0   11 124.0 0.2 1238.0, 2778.0 0.89
LG/J m 1677.0 325.0   11 97.9 0.194 965.0, 2091.0 0.24
LP/J m 1011.0 586.0   9 195.0 0.58 557.0, 2145.0 -0.86
MA/MyJ m 2349.0 549.0   9 183.0 0.234 1589.0, 3549.0 1.36
MRL/MpJ m 1472.0 224.0   11 67.6 0.152 1242.0, 1835.0 -0.1
NOD/ShiLtJ m 2669.0 762.0   11 230.0 0.285 1400.0, 3976.0 1.89
NOR/LtJ m 2411.0 511.0   8 181.0 0.212 1457.0, 3141.0 1.46
NZB/BlNJ m 1070.0 209.0   11 63.0 0.195 663.0, 1343.0 -0.77
NZW/LacJ m 1078.0 164.0   9 54.6 0.152 743.0, 1266.0 -0.75
P/J m 1807.0 170.0   9 56.5 0.0938 1607.0, 2149.0 0.46
PL/J m 1798.0 369.0   12 106.0 0.205 1326.0, 2521.0 0.44
RIIIS/J m 2051.0 301.0   9 100.0 0.147 1536.0, 2445.0 0.86
SJL/J m 945.0 352.0   11 106.0 0.373 461.0, 1671.0 -0.97
SM/J m 1999.0 203.0   8 71.9 0.102 1714.0, 2222.0 0.78
SWR/J m 1394.0 288.0   12 83.0 0.206 1095.0, 1867.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 450.18 107.5343 661.8117 238.5483
A/J m 257.575 120.227 494.1864 20.9636
AKR/J m 1905.1111 138.8262 2178.3264 1631.8958
BALB/cJ m 968.7333 138.8262 1241.9487 695.518
BTBR T+ Itpr3tf/J m 1909.6667 138.8262 2182.882 1636.4513
BUB/BnJ m 1607.0 147.2475 1896.7886 1317.2114
C3H/HeJ m 1104.2 107.5343 1315.8317 892.5683
C57BL/6J m 1128.4167 120.227 1365.0281 891.8053
C57BLKS/J m 775.1 131.7021 1034.2948 515.9052
C57BR/cdJ m 2134.2667 107.5343 2345.8983 1922.635
C58/J m 1998.1111 138.8262 2271.3264 1724.8958
CBA/J m 1051.1333 107.5343 1262.765 839.5017
CE/J m 1546.2222 138.8262 1819.4375 1273.0069
DBA/2J m 1085.4722 98.165 1278.6646 892.2798
FVB/NJ m 2209.2222 138.8262 2482.4375 1936.0069
I/LnJ m 2065.2727 125.5731 2312.4053 1818.1402
LG/J m 1677.0909 125.5731 1924.2235 1429.9584
LP/J m 1011.1111 138.8262 1284.3264 737.8958
MA/MyJ m 2349.1111 138.8262 2622.3264 2075.8958
MRL/MpJ m 1471.7273 125.5731 1718.8598 1224.5947
NOD/ShiLtJ m 2669.3636 125.5731 2916.4962 2422.2311
NOR/LtJ m 2410.625 147.2475 2700.4136 2120.8364
NZB/BlNJ m 1070.1818 125.5731 1317.3144 823.0493
NZW/LacJ m 1078.4444 138.8262 1351.6598 805.2291
P/J m 1807.3333 138.8262 2080.5487 1534.118
PL/J m 1797.5 120.227 2034.1114 1560.8886
RIIIS/J m 2050.7778 138.8262 2323.9931 1777.5625
SJL/J m 945.1818 125.5731 1192.3144 698.0493
SM/J m 1999.375 147.2475 2289.1636 1709.5864
SWR/J m 1393.5833 120.227 1630.1947 1156.9719




  GWAS USING LINEAR MIXED MODELS

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