Phenotype measure:   Schalkwyk1   dur_center_EPM


  STRAIN COMPARISON PLOT
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Schalkwyk1 - duration in center, 5 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means112   s
Median of the strain means107   s
SD of the strain means± 24.3
Coefficient of variation (CV)0.217
Min–max range of strain means86.9   –   152   s
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 43856.1077 6265.1582 2.3449 0.0316
Residuals 78 208400.8022 2671.8052


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 95.5 24.3   11 7.34 0.255 64.7, 144.0 -0.68
A/J m 118.0 72.4   11 21.8 0.612 43.2, 300.0 0.24
BALB/cByJ m 152.0 96.8   11 29.2 0.637 38.3, 300.0 1.64
C3H/HeJ m 140.0 46.2   9 15.4 0.331 65.7, 219.0 1.15
C57BL/6J m 95.4 12.0   11 3.63 0.126 74.6, 118.0 -0.69
DBA/2J m 90.0 32.9   11 9.91 0.365 47.5, 168.0 -0.91
FVB/NJ m 119.0 20.1   11 6.06 0.168 90.1, 145.0 0.28
SJL/J m 86.9 47.9   11 14.4 0.552 40.0, 212.0 -1.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 95.5182 15.585 126.5455 64.4909
A/J m 118.3091 15.585 149.3364 87.2818
BALB/cByJ m 152.0364 15.585 183.0637 121.0091
C3H/HeJ m 139.7556 17.2298 174.0575 105.4536
C57BL/6J m 95.3909 15.585 126.4182 64.3636
DBA/2J m 89.9818 15.585 121.0091 58.9545
FVB/NJ m 119.2545 15.585 150.2818 88.2272
SJL/J m 86.8818 15.585 117.9091 55.8545




  GWAS USING LINEAR MIXED MODELS