Phenotype measure:   Schalkwyk1   laten_open_EPM


  STRAIN COMPARISON PLOT
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Schalkwyk1 - latency to enter open arms, 5 min test



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means156   s
Median of the strain means164   s
SD of the strain means± 91.3
Coefficient of variation (CV)0.587
Min–max range of strain means37.6   –   294   s
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 631460.9679 90208.7097 11.7086 < 0.0001
Residuals 78 600949.475 7704.4804


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 37.6 33.1   11 9.99 0.881 2.59, 93.2 -1.29
A/J m 294.0 19.3   11 5.82 0.0656 236.0, 300.0 1.51
BALB/cByJ m 246.0 115.0   11 34.6 0.466 14.2, 300.0 0.99
C3H/HeJ m 83.1 119.0   9 39.5 1.43 0.93, 300.0 -0.79
C57BL/6J m 56.8 73.7   11 22.2 1.3 5.34, 259.0 -1.08
DBA/2J m 171.0 104.0   11 31.4 0.61 20.7, 300.0 0.17
FVB/NJ m 158.0 63.5   11 19.2 0.401 73.8, 260.0 0.03
SJL/J m 199.0 118.0   11 35.5 0.593 4.39, 300.0 0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 37.6418 26.4652 90.33 0.0
A/J m 294.1818 26.4652 346.87 241.4936
BALB/cByJ m 245.8818 26.4652 298.57 193.1936
C3H/HeJ m 83.1033 29.2584 141.3523 24.8544
C57BL/6J m 56.8273 26.4652 109.5155 4.1391
DBA/2J m 170.8636 26.4652 223.5518 118.1755
FVB/NJ m 158.4455 26.4652 211.1336 105.7573
SJL/J m 198.7718 26.4652 251.46 146.0836




  GWAS USING LINEAR MIXED MODELS