Project measure / variable:   Schalkwyk1   entry_open_EPM

ID, description, units MPD:34509   entry_open_EPM   number of open arms entries, 5 min test   [n]  
Data set, strains Schalkwyk1   inbred   8 strains     sex: m     age: 9-11wks
Procedure elevated plus maze
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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.94   n
Median of the strain means3.00   n
SD of the strain means± 3.25
Coefficient of variation (CV)0.826
Min–max range of strain means0.182   –   9.18   n
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 815.3356 116.4765 10.6963 < 0.0001
Residuals 78 849.3737 10.8894


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 8.64 5.12   11 1.54 0.593 1.0, 14.0 1.44
A/J m 0.182 0.603   11 0.182 3.32 -1.15
BALB/cByJ m 1.73 4.24   11 1.28 2.46 -0.68
C3H/HeJ m 3.78 3.07   9 1.02 0.813 -0.05
C57BL/6J m 9.18 4.35   11 1.31 0.474 1.0, 17.0 1.61
DBA/2J m 3.09 2.66   11 0.803 0.862 -0.26
FVB/NJ m 2.91 1.3   11 0.392 0.447 1.0, 5.0 -0.32
SJL/J m 2.0 2.24   11 0.674 1.12 -0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 8.6364 0.995 10.6172 6.6555
A/J m 0.1818 0.995 2.1626 0.0
BALB/cByJ m 1.7273 0.995 3.7081 0.0
C3H/HeJ m 3.7778 1.1 5.9676 1.5879
C57BL/6J m 9.1818 0.995 11.1626 7.201
DBA/2J m 3.0909 0.995 5.0717 1.1101
FVB/NJ m 2.9091 0.995 4.8899 0.9283
SJL/J m 2.0 0.995 3.9808 0.0192




  GWAS USING LINEAR MIXED MODELS

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