Project measure / variable:   Kas1   pct_axon150

ID, description, units MPD:34406   pct_axon150   percent of 100-150 µm2 axons   [%]  
Data set, strains Kas1   inbred   6 strains     sex: m     age: 22-31wks
Procedure microscopy
Ontology mappings

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  STRAIN COMPARISON PLOT
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Kas1 - percent of 100-150 µm2 axons

C57BL/6JAKR/J129X1/SvJDBA/2JA/JB6.A-Chr1 % -2024681012141618202224femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means5.11   %
Median of the strain means2.22   %
SD of the strain means± 7.31
Coefficient of variation (CV)1.43
Min–max range of strain means0   –   19.0   %
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 1205.6308 241.1262 34.5965 < 0.0001
Residuals 29 202.1204 6.9697


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 2.96 2.02   7 0.765 0.684 0.775, 5.88 -0.29
A/J m 0.0 0.0   6 0.0 0.0 -0.7
AKR/J m 7.22 4.41   7 1.67 0.612 2.96, 13.8 0.29
B6.A-Chr1 m 0.0 0.0   7 0.0 0.0 -0.7
C57BL/6J m 19.0 4.16   4 2.08 0.219 15.0, 23.0 1.9
DBA/2J m 1.48 1.71   4 0.855 1.16 -0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 2.959 0.9978 4.9998 0.9182
A/J m 0.0 1.0778 2.2043 -2.2043
AKR/J m 7.2157 0.9978 9.2565 5.1749
B6.A-Chr1 m 0.0 0.9978 2.0408 -2.0408
C57BL/6J m 18.975 1.32 21.6747 16.2753
DBA/2J m 1.475 1.32 4.1747 -1.2247




  GWAS USING LINEAR MIXED MODELS

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