Phenotype measure:   Kas1   pct_axon100

ID, description, units MPD:34405   pct_axon100   percent of 50-100 µm2 axons   [%]
Data set, strains Kas1   inbred   6 strains     sex: m     age: 22-31wks
Procedure microscopy
Ontology mappings


  STRAIN COMPARISON PLOT
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Kas1 - percent of 50-100 µm2 axons



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means23.2   %
Median of the strain means25.2   %
SD of the strain means± 13.4
Coefficient of variation (CV)0.576
Min–max range of strain means1.61   –   36.9   %
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 5024.6001 1004.92 11.446 < 0.0001
Residuals 29 2546.0917 87.7963


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 28.2 5.25   7 1.99 0.186 20.5, 36.0 0.37
A/J m 1.61 1.79   6 0.733 1.12 0.0, 4.89 -1.62
AKR/J m 35.4 4.06   7 1.54 0.115 27.6, 38.9 0.91
B6.A-Chr1 m 22.2 15.7   7 5.93 0.706 4.23, 52.5 -0.08
C57BL/6J m 36.9 6.18   4 3.09 0.167 29.2, 42.5 1.02
DBA/2J m 15.1 15.0   4 7.49 0.994 1.99, 28.6 -0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 28.1714 3.5415 35.4146 20.9282
A/J m 1.6083 3.8253 9.4319 0.0
AKR/J m 35.3714 3.5415 42.6146 28.1282
B6.A-Chr1 m 22.2386 3.5415 29.4818 14.9954
C57BL/6J m 36.875 4.685 46.4569 27.2931
DBA/2J m 15.0775 4.685 24.6594 5.4956




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.