Phenotype measure:   Kas1   pct_axon50

ID, description, units MPD:34404   pct_axon50   percent of 0-50 µm2 axons   [%]
Data set, strains Kas1   inbred   6 strains     sex: m     age: 22-31wks
Procedure microscopy
Ontology mappings


  STRAIN COMPARISON PLOT
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Kas1 - percent of 0-50 µm2 axons



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means71.4   %
Median of the strain means73.3   %
SD of the strain means± 19.7
Coefficient of variation (CV)0.277
Min–max range of strain means42.5   –   98.4   %
Mean sample size per strain5.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 9960.9414 1992.1883 20.9394 < 0.0001
Residuals 29 2759.0855 95.1409


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 68.8 6.51   7 2.46 0.0946 58.1, 78.1 -0.13
A/J m 98.4 1.8   6 0.734 0.0183 95.1, 100.0 1.37
AKR/J m 57.4 4.89   7 1.85 0.0852 48.3, 63.0 -0.71
B6.A-Chr1 m 77.8 15.7   7 5.93 0.202 47.5, 95.8 0.33
C57BL/6J m 42.5 2.03   4 1.02 0.0478 41.2, 45.5 -1.46
DBA/2J m 83.3 16.9   4 8.43 0.202 68.2, 98.0 0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 68.8286 3.6867 76.3687 61.2885
A/J m 98.3833 3.9821 106.5276 90.2391
AKR/J m 57.4143 3.6867 64.9544 49.8742
B6.A-Chr1 m 77.7714 3.6867 85.3115 70.2313
C57BL/6J m 42.5 4.877 52.4746 32.5254
DBA/2J m 83.3 4.877 93.2746 73.3254




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.