Phenotype measure:   Kas1   area_ventral_root

ID, description, units MPD:34401   area_ventral_root   size, area of total ventral root   [µm2]
Data set, strains Kas1   inbred   6 strains     sex: m     age: 22-31wks
Procedure microscopy
Ontology mappings


  STRAIN COMPARISON PLOT
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Kas1 - size, area of total ventral root



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means51092   µm2
Median of the strain means49788   µm2
SD of the strain means± 12385
Coefficient of variation (CV)0.242
Min–max range of strain means38749   –   72329   µm2
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 2424249759.5254 606062439.8813 19.975 < 0.0001
Residuals 18 546139143.0833 30341063.5046


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 38749.0 4708.0   4 2354.0 0.121 34260.0, 44873.0 -1.0
A/J m 39633.0 4272.0   4 2136.0 0.108 34545.0, 43377.0 -0.93
AKR/J m 50819.0 5927.0   6 2420.0 0.117 45236.0, 59941.0 -0.02
B6.A-Chr1 m 48757.0 3460.0   6 1412.0 0.071 42806.0, 52601.0 -0.19
C57BL/6J m 72329.0 9731.0   3 5618.0 0.135 63807.0, 82932.0 1.71
DBA/2J m 56265.0 0.0   1   0.0 0.0 56265.0, 56265.0 0.42


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 38749.0 2754.1361 44535.2253 32962.7747
A/J m 39632.75 2754.1361 45418.9753 33846.5247
AKR/J m 50818.8333 2248.7427 55543.2665 46094.4001
B6.A-Chr1 m 48756.8333 2248.7427 53481.2665 44032.4001
C57BL/6J m 72329.3333 3180.2025 79010.6908 65647.9758




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.