Phenotype measure:   CGDpheno1   LTM

ID, description, units MPD:31885   LTM   lean tissue mass, head excluded   [g]
Data set, strains CGDpheno1   inbred w/CC7   69 strains     sex: both     age: 13wks
Procedure DXA
Ontology mappings

  STRAIN COMPARISON PLOT
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CGDpheno1 - lean tissue mass, head excluded



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested69 strains68 strains
Mean of the strain means14.2   g 17.9   g
Median of the strain means14.3   g 17.8   g
SD of the strain means± 3.59 ± 4.59
Coefficient of variation (CV)0.253 0.256
Min–max range of strain means8.42   –   23.3   g 9.57   –   31.7   g
Mean sample size per strain6.8   mice 6.6   mice


  STRAIN MEANS (SUBMITTER-ADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 13.5 1.56   8 0.552 0.116 -0.19
129S1/SvImJ m 18.1 1.53   7 0.577 0.0842 0.04
A/J f 14.5 1.52   8 0.537 0.105 0.08
A/J m 18.1 1.49   8 0.527 0.0826 0.04
AKR/J f 19.4 1.45   8 0.513 0.075 1.45
AKR/J m 20.6 1.52   8 0.537 0.074 0.59
ALR/LtJ f 20.5 1.65   8 0.584 0.0808 1.75
ALR/LtJ m 23.7 1.65   8 0.584 0.0696 1.26
ALS/LtJ f 21.5 1.39   7 0.526 0.0648 2.03
ALS/LtJ m 26.3 1.4   8 0.494 0.0531 1.83
BALB/cByJ f 15.5 1.58   8 0.558 0.102 0.36
BALB/cByJ m 19.6 1.58   8 0.558 0.0805 0.37
BPH/2J f 12.5 1.49   8 0.526 0.119 -0.47
BPL/1J f 11.2 1.46   4 0.732 0.13 -0.84
BPL/1J m 14.5 1.32   2   0.934 0.0911 -0.74
BPN/3J f 15.3 1.33   5 0.593 0.0866 0.31
BPN/3J m 19.2 1.41   4 0.707 0.0737 0.28
BTBR T+ Itpr3tf/J f 19.0 1.63   8 0.575 0.0856 1.34
BTBR T+ Itpr3tf/J m 23.6 1.63   8 0.575 0.0689 1.24
BUB/BnJ f 18.4 1.52   7 0.576 0.0829 1.17
BUB/BnJ m 21.2 1.45   4 0.725 0.0684 0.72
C3H/HeJ f 15.6 1.54   8 0.545 0.0986 0.39
C3H/HeJ m 18.4 1.52   8 0.538 0.0827 0.11
C57BL/6J f 15.6 1.68   98 0.17 0.108 0.39
C57BL/6J m 20.3 1.66   91 0.174 0.0815 0.52
C57BR/cdJ f 16.0 1.36   4 0.679 0.0849 0.5
C57BR/cdJ m 19.1 1.36   4 0.679 0.0709 0.26
C57L/J f 15.5 1.57   7 0.592 0.101 0.36
C57L/J m 17.0 1.49   8 0.526 0.0874 -0.2
C58/J f 15.1 1.52   8 0.537 0.101 0.25
C58/J m 17.2 1.63   8 0.575 0.0946 -0.15
CALB/RkJ m 14.1 1.35   6 0.55 0.0958 -0.83
CAST/EiJ f 9.32 1.37   7 0.519 0.147 -1.36
CAST/EiJ m 11.3 1.37   6 0.557 0.12 -1.44
CBA/CaJ f 14.3 1.59   8 0.563 0.111 0.03
CBA/CaJ m 18.4 1.49   8 0.525 0.0807 0.11
CE/J f 14.9 1.47   7 0.557 0.0989 0.19
CE/J m 18.8 1.4   8 0.494 0.0744 0.2
CZECHI/EiJ f 11.1 1.38   6 0.565 0.124 -0.86
CZECHI/EiJ m 13.1 1.34   4 0.67 0.102 -1.05
CZECHII/EiJ f 9.39 1.37   7 0.518 0.146 -1.34
CZECHII/EiJ m 12.6 1.37   8 0.485 0.108 -1.16
DBA/1J f 14.2 1.55   7 0.587 0.11 0.0
DBA/1J m 17.0 1.53   7 0.58 0.0902 -0.2
DBA/2J f 13.2 1.49   8 0.528 0.113 -0.28
DBA/2J m 16.8 1.49   8 0.528 0.0891 -0.24
DDY/JclSidSeyFrkJ f 15.6 1.38   6 0.565 0.0886 0.39
DDY/JclSidSeyFrkJ m 19.8 1.38   6 0.565 0.07 0.41
EL/SuzSeyFrkJ f 15.6 1.47   8 0.521 0.0946 0.39
EL/SuzSeyFrkJ m 19.4 1.42   6 0.58 0.073 0.33
FVB/NJ f 14.9 1.47   7 0.554 0.0984 0.19
FVB/NJ m 20.8 1.56   8 0.552 0.075 0.63
I/LnJ f 14.3 1.49   8 0.526 0.104 0.03
I/LnJ m 16.6 1.35   5 0.604 0.0815 -0.28
JF1/MsJ f 10.9 1.39   8 0.491 0.128 -0.92
JF1/MsJ m 13.0 1.38   7 0.522 0.106 -1.07
KK/HlJ f 17.5 1.36   7 0.515 0.0778 0.92
KK/HlJ m 20.0 1.37   7 0.517 0.0684 0.46
LEWES/EiJ f 11.4 1.34   6 0.547 0.118 -0.78
LEWES/EiJ m 15.1 1.36   8 0.481 0.0901 -0.61
LG/J m 31.7 1.32   3 0.761 0.0416 3.01
LP/J f 11.3 1.5   6 0.612 0.133 -0.81
LP/J m 15.4 1.44   8 0.508 0.0934 -0.55
LT/SvEiJ f 16.5 1.38   3 0.794 0.0832 0.64
LT/SvEiJ m 19.0 1.38   3 0.794 0.0724 0.24
MA/MyJ f 14.7 1.38   4 0.691 0.0941 0.14
MA/MyJ m 17.4 1.38   4 0.691 0.0795 -0.11
MOLF/EiJ f 10.4 1.37   8 0.484 0.132 -1.06
MOLF/EiJ m 10.8 1.37   4 0.683 0.127 -1.55
MRL/MpJ f 22.4 1.54   8 0.545 0.0688 2.28
MRL/MpJ m 29.6 1.61   8 0.568 0.0543 2.55
MSM/MsJ f 9.7 1.32   2   0.934 0.136 -1.25
NH/KiPtJ f 11.6 1.34   4 0.671 0.116 -0.72
NH/KiPtJ m 16.2 1.32   3 0.762 0.0815 -0.37
NOD/ShiLtJ f 14.8 1.44   5 0.644 0.0974 0.17
NOD/ShiLtJ m 19.4 1.49   8 0.526 0.0769 0.33
NON/ShiLtJ f 19.7 1.38   8 0.487 0.0701 1.53
NON/ShiLtJ m 21.8 1.56   6 0.637 0.0716 0.85
NOR/LtJ f 16.6 1.6   8 0.567 0.0967 0.67
NOR/LtJ m 20.1 1.4   8 0.494 0.0695 0.48
NZB/BlNJ f 17.3 1.63   8 0.575 0.0939 0.86
NZB/BlNJ m 22.3 1.46   6 0.594 0.0651 0.96
NZL/LtJ f 20.2 1.39   8 0.492 0.0688 1.67
NZL/LtJ m 25.8 1.41   8 0.497 0.0545 1.72
NZM2410/J f 13.7 1.42   7 0.536 0.104 -0.14
NZM2410/J m 19.4 1.4   6 0.57 0.0718 0.33
NZO/HlLtJ f 23.3 1.37   7 0.52 0.0589 2.53
NZO/HlLtJ m 28.1 1.37   8 0.484 0.0487 2.22
NZW/LacJ f 16.3 1.59   8 0.563 0.0975 0.58
NZW/LacJ m 22.4 1.53   8 0.54 0.0681 0.98
PANCEVO/EiJ f 8.78 1.36   5 0.609 0.155 -1.51
PANCEVO/EiJ m 9.58 1.37   7 0.517 0.143 -1.81
PERA/EiJ f 12.0 1.38   6 0.565 0.116 -0.61
PERA/EiJ m 17.2 1.34   5 0.6 0.0782 -0.15
PERC/EiJ f 9.52 1.35   5 0.602 0.141 -1.3
PERC/EiJ m 12.4 1.37   8 0.483 0.11 -1.2
P/J f 11.6 1.44   6 0.589 0.125 -0.72
P/J m 16.4 1.5   8 0.531 0.0916 -0.33
PL/J f 12.5 1.65   8 0.584 0.132 -0.47
PL/J m 15.6 1.59   8 0.563 0.102 -0.5
PN/nBSwUmabJ f 14.2 1.41   8 0.5 0.0992 0.0
PN/nBSwUmabJ m 18.3 1.43   8 0.506 0.0781 0.09
PWD/PhJ f 9.89 1.61   7 0.607 0.162 -1.2
PWD/PhJ m 11.6 1.65   8 0.584 0.142 -1.37
RBA/DnJ f 10.7 1.28   2   0.905 0.119 -0.97
RBA/DnJ m 14.2 1.36   5 0.609 0.0959 -0.81
RBF/DnJ f 18.7 1.46   6 0.597 0.0781 1.25
RBF/DnJ m 24.3 1.54   8 0.546 0.0636 1.39
RF/J f 18.4 1.36   5 0.609 0.074 1.17
RF/J m 21.8 1.33   7 0.504 0.061 0.85
RIIIS/J f 11.4 1.32   4 0.658 0.116 -0.78
RIIIS/J m 15.2 1.31   4 0.654 0.0863 -0.59
SB/LeJ f 13.5 1.35   8 0.477 0.1 -0.19
SB/LeJ m 15.1 1.35   8 0.477 0.0892 -0.61
SEA/GnJ f 17.8 1.37   8 0.485 0.0772 1.0
SEA/GnJ m 20.2 1.36   8 0.481 0.0674 0.5
SF/CamEiJ f 10.3 1.57   8 0.556 0.153 -1.09
SF/CamEiJ m 14.2 1.42   8 0.501 0.1 -0.81
SJL/J f 14.9 1.57   7 0.592 0.105 0.19
SJL/J m 19.8 1.48   5 0.663 0.0748 0.41
SKIVE/EiJ f 11.0 1.38   8 0.488 0.125 -0.89
SKIVE/EiJ m 12.8 1.39   8 0.491 0.109 -1.11
SM/J f 11.5 1.63   8 0.575 0.141 -0.75
SM/J m 15.9 1.65   8 0.584 0.104 -0.44
SOD1/EiJ f 10.3 1.53   7 0.578 0.149 -1.09
SOD1/EiJ m 12.9 1.42   4 0.708 0.11 -1.09
SPRET/EiJ f 8.97 1.39   8 0.491 0.155 -1.46
SPRET/EiJ m 9.57 1.39   8 0.493 0.146 -1.82
SWR/J f 13.7 1.53   7 0.577 0.111 -0.14
SWR/J m 16.9 1.47   5 0.659 0.0872 -0.22
TALLYHO/JngJ f 17.2 1.44   8 0.51 0.0839 0.84
TIRANO/EiJ f 9.7 1.34   6 0.548 0.138 -1.25
TIRANO/EiJ m 14.7 1.32   4 0.659 0.0895 -0.7
WSB/EiJ f 8.42 1.38   8 0.487 0.164 -1.61
WSB/EiJ m 11.1 1.34   7 0.508 0.121 -1.48
ZALENDE/EiJ f 10.6 1.4   7 0.528 0.132 -1.0
ZALENDE/EiJ m 14.5 1.34   2   0.945 0.0924 -0.74




  GWAS USING LINEAR MIXED MODELS