Project measure / variable:   Yuan1   bw_M12

ID, description, units MPD:27012   bw_M12   body weight   [g]  at age 12mo  
Data set, strains Yuan1   inbred   30 strains     sex: both     age: 52wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Yuan1 - body weight at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains28 strains
Mean of the strain means28.8   g 33.2   g
Median of the strain means26.0   g 31.4   g
SD of the strain means± 10.3 ± 7.53
Coefficient of variation (CV)0.358 0.227
Min–max range of strain means14.3   –   70.3   g 22.2   –   60.3   g
Mean sample size per strain7.5   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1270.9431 1270.9431 60.621 < 0.0001
strain 27 26624.8907 986.1071 47.035 < 0.0001
sex:strain 27 1752.9448 64.9239 3.0967 < 0.0001
Residuals 364 7631.4084 20.9654


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 25.3 2.14   8 0.757 0.0845 22.8, 28.1 -0.34
129S1/SvImJ m 31.4 3.3   8 1.16 0.105 28.0, 37.8 -0.24
A/J f 28.1 3.69   8 1.3 0.131 24.5, 36.0 -0.06
A/J m 30.3 1.56   6 0.639 0.0516 27.4, 31.8 -0.39
BALB/cByJ f 26.2 2.38   8 0.842 0.0907 23.5, 30.8 -0.25
BALB/cByJ m 28.9 2.36   7 0.893 0.0819 26.2, 33.2 -0.57
BTBR T+ Itpr3tf/J f 43.6 6.45   8 2.28 0.148 31.2, 51.6 1.44
BTBR T+ Itpr3tf/J m 39.5 4.98   7 1.88 0.126 32.6, 46.9 0.84
BUB/BnJ f 27.4 2.54   3 1.47 0.0927 24.5, 29.0 -0.13
BUB/BnJ m 32.2 2.48   5 1.11 0.0771 28.5, 34.6 -0.13
C3H/HeJ f 25.6 4.85   8 1.72 0.19 21.6, 36.9 -0.31
C3H/HeJ m 30.8 1.67   8 0.591 0.0543 28.0, 33.4 -0.32
C57BL/10J f 23.1 1.17   7 0.442 0.0506 21.5, 24.7 -0.55
C57BL/10J m 29.6 4.34   8 1.54 0.147 23.8, 35.9 -0.48
C57BL/6J f 25.0 2.08   8 0.737 0.0834 22.3, 28.8 -0.36
C57BL/6J m 31.5 1.73   8 0.612 0.055 29.1, 33.9 -0.23
C57BLKS/J f 22.9 1.52   8 0.539 0.0667 20.6, 25.6 -0.57
C57BLKS/J m 29.1 2.9   8 1.03 0.0998 25.0, 33.7 -0.54
C57BR/cdJ f 28.8 5.88   8 2.08 0.204 24.0, 41.8 0.0
C57BR/cdJ m 36.0 4.8   8 1.7 0.133 28.5, 44.7 0.37
C57L/J f 30.6 4.31   8 1.52 0.141 26.1, 37.5 0.18
C57L/J m 38.8 3.46   8 1.22 0.0891 32.8, 43.6 0.74
CAST/EiJ f 14.3 0.171   4 0.0854 0.0119 14.1, 14.5 -1.41
CBA/J f 27.6 3.55   8 1.25 0.129 22.3, 33.6 -0.11
CBA/J m 39.9 5.39   6 2.2 0.135 34.4, 46.7 0.89
DBA/2J f 27.6 4.56   7 1.73 0.165 21.2, 32.8 -0.11
DBA/2J m 28.5 4.51   8 1.6 0.158 23.2, 37.3 -0.62
FVB/NJ f 28.3 2.58   8 0.911 0.0911 23.1, 31.0 -0.04
FVB/NJ m 29.7 3.29   7 1.24 0.111 25.6, 34.4 -0.47
KK/HlJ f 29.9 7.39   7 2.79 0.247 20.5, 42.2 0.11
KK/HlJ m 34.4 1.9   7 0.717 0.0552 31.2, 37.4 0.16
LP/J f 22.4 1.88   8 0.663 0.0838 19.6, 24.7 -0.62
LP/J m 27.4 1.53   8 0.54 0.0558 24.3, 29.3 -0.77
MRL/MpJ f 41.0 8.49   7 3.21 0.207 30.6, 53.6 1.19
MRL/MpJ m 42.4 4.47   8 1.58 0.106 32.7, 47.0 1.22
NOD.B10Sn-H2b/J f 39.7 4.0   8 1.42 0.101 34.0, 45.5 1.06
NOD.B10Sn-H2b/J m 40.7 3.29   7 1.24 0.0808 36.1, 45.2 1.0
NON/ShiLtJ f 33.3 6.35   7 2.4 0.191 22.6, 44.2 0.44
NON/ShiLtJ m 41.5 9.97   8 3.52 0.24 25.8, 52.7 1.1
NZO/HlLtJ f 70.3 6.03   6 2.46 0.0858 62.6, 76.0 4.04
NZO/HlLtJ m 60.3 22.2   4 11.1 0.368 32.0, 84.3 3.6
NZW/LacJ f 39.6 4.99   8 1.76 0.126 31.0, 46.5 1.05
NZW/LacJ m 35.6 3.25   7 1.23 0.0915 31.1, 40.0 0.32
P/J f 24.8 1.14   7 0.429 0.0458 23.3, 26.4 -0.38
PL/J f 22.1 1.96   7 0.742 0.089 19.7, 24.5 -0.65
PL/J m 26.6 2.45   5 1.1 0.092 23.5, 29.6 -0.88
PWD/PhJ f 21.9 4.63   9 1.54 0.212 17.2, 30.0 -0.67
PWD/PhJ m 25.2 3.09   12 0.891 0.123 21.8, 29.9 -1.06
RIIIS/J f 22.5 2.62   8 0.928 0.117 17.6, 24.7 -0.61
RIIIS/J m 31.3 3.25   8 1.15 0.104 25.8, 36.5 -0.25
SJL/J f 23.5 3.36   7 1.27 0.143 19.3, 29.1 -0.51
SJL/J m 25.1 3.22   8 1.14 0.128 19.6, 29.1 -1.08
SM/J f 25.9 5.35   8 1.89 0.207 19.6, 37.3 -0.28
SM/J m 31.5 5.79   8 2.05 0.184 21.2, 41.5 -0.23
SWR/J f 24.7 3.0   7 1.14 0.121 20.0, 29.8 -0.39
SWR/J m 29.2 2.29   8 0.808 0.0783 25.8, 32.4 -0.53
WSB/EiJ f 16.6 1.88   9 0.625 0.113 13.7, 19.0 -1.18
WSB/EiJ m 22.2 2.9   9 0.965 0.13 19.3, 28.5 -1.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 25.325 1.6189 28.5085 22.1415
129S1/SvImJ m 31.4 1.6189 34.5835 28.2165
A/J f 28.1125 1.6189 31.296 24.929
A/J m 30.3 1.8693 33.976 26.624
BALB/cByJ f 26.2375 1.6189 29.421 23.054
BALB/cByJ m 28.8571 1.7306 32.2604 25.4539
BTBR T+ Itpr3tf/J f 43.6375 1.6189 46.821 40.454
BTBR T+ Itpr3tf/J m 39.4571 1.7306 42.8604 36.0539
BUB/BnJ f 27.4333 2.6436 32.6319 22.2347
BUB/BnJ m 32.24 2.0477 36.2668 28.2132
C3H/HeJ f 25.5875 1.6189 28.771 22.404
C3H/HeJ m 30.8 1.6189 33.9835 27.6165
C57BL/10J f 23.1286 1.7306 26.5318 19.7253
C57BL/10J m 29.6125 1.6189 32.796 26.429
C57BL/6J f 24.975 1.6189 28.1585 21.7915
C57BL/6J m 31.5 1.6189 34.6835 28.3165
C57BLKS/J f 22.85 1.6189 26.0335 19.6665
C57BLKS/J m 29.0625 1.6189 32.246 25.879
C57BR/cdJ f 28.775 1.6189 31.9585 25.5915
C57BR/cdJ m 35.975 1.6189 39.1585 32.7915
C57L/J f 30.6125 1.6189 33.796 27.429
C57L/J m 38.8375 1.6189 42.021 35.654
CBA/J f 27.55 1.6189 30.7335 24.3665
CBA/J m 39.9333 1.8693 43.6093 36.2574
DBA/2J f 27.6 1.7306 31.0033 24.1967
DBA/2J m 28.5 1.6189 31.6835 25.3165
FVB/NJ f 28.3 1.6189 31.4835 25.1165
FVB/NJ m 29.7143 1.7306 33.1176 26.311
KK/HlJ f 29.9 1.7306 33.3033 26.4967
KK/HlJ m 34.4 1.7306 37.8033 30.9967
LP/J f 22.4 1.6189 25.5835 19.2165
LP/J m 27.375 1.6189 30.5585 24.1915
MRL/MpJ f 41.0286 1.7306 44.4318 37.6253
MRL/MpJ m 42.3875 1.6189 45.571 39.204
NOD.B10Sn-H2b/J f 39.7375 1.6189 42.921 36.554
NOD.B10Sn-H2b/J m 40.6571 1.7306 44.0604 37.2539
NON/ShiLtJ f 33.2571 1.7306 36.6604 29.8539
NON/ShiLtJ m 41.45 1.6189 44.6335 38.2665
NZO/HlLtJ f 70.2667 1.8693 73.9426 66.5907
NZO/HlLtJ m 60.35 2.2894 64.8521 55.8479
NZW/LacJ f 39.6 1.6189 42.7835 36.4165
NZW/LacJ m 35.5857 1.7306 38.989 32.1824
PL/J f 22.0571 1.7306 25.4604 18.6539
PL/J m 26.64 2.0477 30.6668 22.6132
PWD/PhJ f 21.8889 1.5263 24.8903 18.8875
PWD/PhJ m 25.175 1.3218 27.7743 22.5757
RIIIS/J f 22.5 1.6189 25.6835 19.3165
RIIIS/J m 31.325 1.6189 34.5085 28.1415
SJL/J f 23.5 1.7306 26.9033 20.0967
SJL/J m 25.1125 1.6189 28.296 21.929
SM/J f 25.9 1.6189 29.0835 22.7165
SM/J m 31.5375 1.6189 34.721 28.354
SWR/J f 24.7429 1.7306 28.1461 21.3396
SWR/J m 29.175 1.6189 32.3585 25.9915
WSB/EiJ f 16.5889 1.5263 19.5903 13.5875
WSB/EiJ m 22.2444 1.5263 25.2459 19.243


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 28.3625 1.1447 30.6136 26.1114
A/J both 29.2063 1.2364 31.6377 26.7748
BALB/cByJ both 27.5473 1.1849 29.8774 25.2173
BTBR T+ Itpr3tf/J both 41.5473 1.1849 43.8774 39.2173
BUB/BnJ both 29.8367 1.6719 33.1245 26.5488
C3H/HeJ both 28.1938 1.1447 30.4448 25.9427
C57BL/10J both 26.3705 1.1849 28.7006 24.0405
C57BL/6J both 28.2375 1.1447 30.4886 25.9864
C57BLKS/J both 25.9562 1.1447 28.2073 23.7052
C57BR/cdJ both 32.375 1.1447 34.6261 30.1239
C57L/J both 34.725 1.1447 36.9761 32.4739
CBA/J both 33.7417 1.2364 36.1731 31.3102
DBA/2J both 28.05 1.1849 30.3801 25.7199
FVB/NJ both 29.0071 1.1849 31.3372 26.6771
KK/HlJ both 32.15 1.2237 34.5565 29.7435
LP/J both 24.8875 1.1447 27.1386 22.6364
MRL/MpJ both 41.708 1.1849 44.0381 39.378
NOD.B10Sn-H2b/J both 40.1973 1.1849 42.5274 37.8673
NON/ShiLtJ both 37.3536 1.1849 39.6836 35.0235
NZO/HlLtJ both 65.3083 1.4778 68.2144 62.4022
NZW/LacJ both 37.5929 1.1849 39.9229 35.2628
PL/J both 24.3486 1.3405 26.9847 21.7124
PWD/PhJ both 23.5319 1.0095 25.5172 21.5467
RIIIS/J both 26.9125 1.1447 29.1636 24.6614
SJL/J both 24.3063 1.1849 26.6363 21.9762
SM/J both 28.7188 1.1447 30.9698 26.4677
SWR/J both 26.9589 1.1849 29.289 24.6289
WSB/EiJ both 19.4167 1.0792 21.539 17.2944




  GWAS USING LINEAR MIXED MODELS