Project measure / variable:   Ackert1   fatwt_M20

ID, description, units MPD:25053   fatwt_M20   weight of fat portion of body mass, head excluded   [g]  at age 20mo  
Data set, strains Ackert1   inbred   28 strains     sex: both     age: 87wks
Procedure DXA
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  STRAIN COMPARISON PLOT
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Ackert1 - weight of fat portion of body mass, head excluded at age 20mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains26 strains
Mean of the strain means6.43   g 6.91   g
Median of the strain means5.90   g 5.94   g
SD of the strain means± 3.44 ± 4.77
Coefficient of variation (CV)0.535 0.690
Min–max range of strain means3.43   –   17.9   g 3.54   –   28.2   g
Mean sample size per strain6.9   mice 6.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.7327 0.7327 0.0958 0.7571
strain 27 3946.2365 146.1569 19.1106 < 0.0001
sex:strain 27 656.3437 24.309 3.1785 < 0.0001
Residuals 306 2340.27 7.6479


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 9.0 5.09   8 1.8 0.565 5.33, 20.4 0.75
129S1/SvImJ m 6.77 2.8   7 1.06 0.414 4.1, 10.7 -0.03
A/J f 5.11 1.54   3 0.887 0.3 3.54, 6.61 -0.38
A/J m 4.47 0.881   4 0.44 0.197 3.38, 5.36 -0.51
BALB/cByJ f 4.7 1.53   5 0.684 0.325 2.3, 6.06 -0.5
BALB/cByJ m 5.49 1.24   7 0.469 0.226 4.13, 7.26 -0.3
BTBR T+ Itpr3tf/J f 4.88 1.49   6 0.607 0.305 3.2, 6.65 -0.45
BTBR T+ Itpr3tf/J m 6.19 0.352   3 0.203 0.0569 5.82, 6.52 -0.15
BUB/BnJ f 3.54 0.8   8 0.283 0.226 2.33, 4.34 -0.84
C3H/HeJ f 3.43 0.495   6 0.202 0.144 2.87, 4.12 -0.87
C3H/HeJ m 4.5 0.722   8 0.255 0.16 3.6, 5.78 -0.51
C57BL/10J f 5.89 1.45   8 0.512 0.246 3.7, 8.16 -0.16
C57BL/10J m 6.42 1.0   6 0.409 0.156 4.83, 7.95 -0.1
C57BL/6J f 4.81 0.809   7 0.306 0.168 3.59, 5.94 -0.47
C57BL/6J m 7.4 2.68   7 1.01 0.363 4.91, 13.0 0.1
C57BLKS/J f 6.09 0.986   7 0.373 0.162 4.96, 7.35 -0.1
C57BLKS/J m 5.67 1.42   7 0.538 0.251 3.28, 6.86 -0.26
C57BR/cdJ f 5.35 0.924   8 0.327 0.173 4.43, 6.84 -0.31
C57BR/cdJ m 7.58 1.12   8 0.395 0.148 5.78, 8.9 0.14
C57L/J f 6.3 2.22   8 0.784 0.352 3.97, 10.1 -0.04
C57L/J m 6.34 2.66   7 1.0 0.419 3.85, 10.2 -0.12
CBA/J f 12.2 5.21   8 1.84 0.427 3.91, 20.4 1.68
CBA/J m 5.67 1.24   8 0.437 0.218 3.95, 6.91 -0.26
DBA/2J f 6.77 3.3   7 1.25 0.487 2.55, 11.5 0.1
DBA/2J m 3.54 0.779   6 0.318 0.22 2.56, 4.59 -0.71
FVB/NJ f 6.24 3.02   6 1.23 0.484 3.02, 9.62 -0.05
FVB/NJ m 6.52 2.18   5 0.976 0.335 5.34, 10.4 -0.08
KK/HlJ f 6.98 2.81   6 1.15 0.403 3.76, 11.1 0.16
KK/HlJ m 6.15 2.9   7 1.1 0.472 3.45, 12.1 -0.16
LP/J f 5.92 0.684   7 0.259 0.115 4.9, 6.6 -0.15
LP/J m 5.3 0.686   8 0.242 0.129 4.27, 6.3 -0.34
MRL/MpJ f 3.56 0.557   4 0.278 0.156 3.02, 4.05 -0.83
MRL/MpJ m 5.79 2.88   4 1.44 0.498 3.36, 9.21 -0.23
NOD.B10Sn-H2b/J f 3.99 0.565   8 0.2 0.142 3.44, 5.23 -0.71
NOD.B10Sn-H2b/J m 5.59 1.01   5 0.452 0.181 4.12, 6.47 -0.28
NON/ShiLtJ f 6.95 3.14   9 1.05 0.452 3.3, 12.7 0.15
NON/ShiLtJ m 10.7 8.22   8 2.91 0.771 2.57, 27.4 0.8
NZO/HlLtJ f 17.9 8.79   5 3.93 0.49 3.21, 25.1 3.34
NZO/HlLtJ m 28.2 7.33   4 3.67 0.261 17.2, 32.7 4.47
NZW/LacJ f 15.1 3.31   8 1.17 0.219 10.6, 20.3 2.52
NZW/LacJ m 12.3 4.09   7 1.55 0.333 7.5, 19.8 1.13
P/J f 4.32 1.6   8 0.565 0.37 2.64, 6.94 -0.61
P/J m 4.13 1.23   6 0.503 0.298 2.65, 5.97 -0.58
PL/J f 3.47 0.597   5 0.267 0.172 2.61, 4.03 -0.86
PWD/PhJ f 7.0 1.24   8 0.44 0.178 5.03, 8.3 0.17
PWD/PhJ m 3.99 1.29   7 0.486 0.322 2.61, 6.52 -0.61
RIIIS/J f 7.0 2.88   8 1.02 0.411 2.52, 11.4 0.17
RIIIS/J m 6.93 2.53   8 0.893 0.364 3.39, 10.3 0.0
SM/J f 5.96 1.85   8 0.653 0.31 3.73, 9.04 -0.14
SM/J m 6.08 2.17   7 0.82 0.357 4.32, 10.2 -0.17
SWR/J f 3.48 0.218   4 0.109 0.0626 3.26, 3.76 -0.86
SWR/J m 4.26 0.297   7 0.112 0.0697 3.89, 4.64 -0.56
WSB/EiJ f 4.0 1.8   8 0.638 0.451 2.92, 8.22 -0.71
WSB/EiJ m 3.62 0.42   6 0.171 0.116 3.11, 4.15 -0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8.9988 0.9777 10.9227 7.0748
129S1/SvImJ m 6.7714 1.0453 8.8282 4.7146
A/J f 5.1133 1.5967 8.2552 1.9715
A/J m 4.4675 1.3827 7.1884 1.7466
BALB/cByJ f 4.702 1.2368 7.1356 2.2684
BALB/cByJ m 5.4886 1.0453 7.5454 3.4318
BTBR T+ Itpr3tf/J f 4.875 1.129 7.0966 2.6534
BTBR T+ Itpr3tf/J m 6.1933 1.5967 9.3352 3.0515
BUB/BnJ f 3.5425 0.9777 5.4665 1.6185
BUB/BnJ m 4.335 1.9555 8.1829 0.4871
C3H/HeJ f 3.4333 1.129 5.6549 1.2117
C3H/HeJ m 4.5025 0.9777 6.4265 2.5785
C57BL/10J f 5.8938 0.9777 7.8177 3.9698
C57BL/10J m 6.4183 1.129 8.6399 4.1967
C57BL/6J f 4.8114 1.0453 6.8682 2.7546
C57BL/6J m 7.4 1.0453 9.4568 5.3432
C57BLKS/J f 6.0871 1.0453 8.1439 4.0303
C57BLKS/J m 5.67 1.0453 7.7268 3.6132
C57BR/cdJ f 5.3487 0.9777 7.2727 3.4248
C57BR/cdJ m 7.575 0.9777 9.499 5.651
C57L/J f 6.2988 0.9777 8.2227 4.3748
C57L/J m 6.3429 1.0453 8.3997 4.2861
CBA/J f 12.2013 0.9777 14.1252 10.2773
CBA/J m 5.67 0.9777 7.594 3.746
DBA/2J f 6.7743 1.0453 8.8311 4.7175
DBA/2J m 3.5433 1.129 5.7649 1.3217
FVB/NJ f 6.2417 1.129 8.4633 4.0201
FVB/NJ m 6.518 1.2368 8.9516 4.0844
KK/HlJ f 6.98 1.129 9.2016 4.7584
KK/HlJ m 6.1471 1.0453 8.2039 4.0903
LP/J f 5.9243 1.0453 7.9811 3.8675
LP/J m 5.2962 0.9777 7.2202 3.3723
MRL/MpJ f 3.565 1.3827 6.2859 0.8441
MRL/MpJ m 5.7925 1.3827 8.5134 3.0716
NOD.B10Sn-H2b/J f 3.99 0.9777 5.914 2.066
NOD.B10Sn-H2b/J m 5.588 1.2368 8.0216 3.1544
NON/ShiLtJ f 6.9533 0.9218 8.7673 5.1394
NON/ShiLtJ m 10.6575 0.9777 12.5815 8.7335
NZO/HlLtJ f 17.942 1.2368 20.3756 15.5084
NZO/HlLtJ m 28.15 1.3827 30.8709 25.4291
NZW/LacJ f 15.0875 0.9777 17.0115 13.1635
NZW/LacJ m 12.2857 1.0453 14.3425 10.2289
P/J f 4.3163 0.9777 6.2402 2.3923
P/J m 4.1317 1.129 6.3533 1.9101
PL/J f 3.468 1.2368 5.9016 1.0344
PL/J m 4.48 1.9555 8.3279 0.6321
PWD/PhJ f 6.9963 0.9777 8.9202 5.0723
PWD/PhJ m 3.99 1.0453 6.0468 1.9332
RIIIS/J f 7.005 0.9777 8.929 5.081
RIIIS/J m 6.935 0.9777 8.859 5.011
SM/J f 5.9563 0.9777 7.8802 4.0323
SM/J m 6.0829 1.0453 8.1397 4.0261
SWR/J f 3.4825 1.3827 6.2034 0.7616
SWR/J m 4.2571 1.0453 6.3139 2.2003
WSB/EiJ f 3.9975 0.9777 5.9215 2.0735
WSB/EiJ m 3.6217 1.129 5.8433 1.4001


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.8851 0.7156 9.2933 6.4769
A/J both 4.7904 1.0561 6.8685 2.7123
BALB/cByJ both 5.0953 0.8097 6.6885 3.5021
BTBR T+ Itpr3tf/J both 5.5342 0.9777 7.4581 3.6102
BUB/BnJ both 3.9387 1.0932 6.0898 1.7877
C3H/HeJ both 3.9679 0.7468 5.4374 2.4985
C57BL/10J both 6.156 0.7468 7.6255 4.6866
C57BL/6J both 6.1057 0.7391 7.5601 4.6513
C57BLKS/J both 5.8786 0.7391 7.3329 4.4242
C57BR/cdJ both 6.4619 0.6914 7.8223 5.1014
C57L/J both 6.3208 0.7156 7.729 4.9126
CBA/J both 8.9356 0.6914 10.2961 7.5752
DBA/2J both 5.1588 0.7693 6.6726 3.645
FVB/NJ both 6.3798 0.8373 8.0274 4.7323
KK/HlJ both 6.5636 0.7693 8.0773 5.0498
LP/J both 5.6103 0.7156 7.0185 4.2021
MRL/MpJ both 4.6788 0.9777 6.6027 2.7548
NOD.B10Sn-H2b/J both 4.789 0.7883 6.3401 3.2379
NON/ShiLtJ both 8.8054 0.6719 10.1275 7.4833
NZO/HlLtJ both 23.046 0.9276 24.8712 21.2208
NZW/LacJ both 13.6866 0.7156 15.0948 12.2784
P/J both 4.224 0.7468 5.6934 2.7545
PL/J both 3.974 1.1569 6.2505 1.6975
PWD/PhJ both 5.4931 0.7156 6.9013 4.0849
RIIIS/J both 6.97 0.6914 8.3304 5.6096
SM/J both 6.0196 0.7156 7.4277 4.6114
SWR/J both 3.8698 0.8667 5.5752 2.1644
WSB/EiJ both 3.8096 0.7468 5.279 2.3401




  GWAS USING LINEAR MIXED MODELS