Project measure / variable:   Evsikova1   horiz_Dk

ID, description, units MPD:24718   horiz_Dk   ambulatory activity (beam break triplets during 24h)   [n]  dark  
Data set, strains Evsikova1   inbred   14 strains     sex: both     age: 26wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Evsikova1 - ambulatory activity (beam break triplets during 24h) dark



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means23949   n 16211   n
Median of the strain means22780   n 13712   n
SD of the strain means± 9916 ± 6405
Coefficient of variation (CV)0.414 0.395
Min–max range of strain means8971   –   38513   n 8556   –   28373   n
Mean sample size per strain7.0   mice 7.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 521097765.7504 521097765.7504 9.5033 0.0025
strain 9 6677821604.0735 741980178.2304 13.5316 < 0.0001
sex:strain 9 935653531.4373 103961503.493 1.896 0.0588
Residuals 120 6579986473.9103 54833220.6159


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8971.0 3038.0   8 1074.0 0.339 6273.0, 15689.0 -1.51
129S1/SvImJ m 8556.0 2637.0   8 932.0 0.308 5868.0, 14150.0 -1.2
A/J f 13596.0 2075.0   7 784.0 0.153 9910.0, 16317.0 -1.04
A/J m 11847.0 1737.0   5 777.0 0.147 9475.0, 13669.0 -0.68
AKR/J f 19538.0 7248.0   4 3624.0 0.371 10577.0, 25676.0 -0.44
AKR/J m 10254.0 3525.0   4 1762.0 0.344 6126.0, 14742.0 -0.93
BALB/cByJ f 27419.0 5803.0   8 2052.0 0.212 19676.0, 36980.0 0.35
BALB/cByJ m 19074.0 3665.0   8 1296.0 0.192 13732.0, 25388.0 0.45
BTBR T+ Itpr3tf/J f 37801.0 21241.0   4 10620.0 0.562 16331.0, 66971.0 1.4
BTBR T+ Itpr3tf/J m 23758.0 7620.0   12 2200.0 0.321 14683.0, 39150.0 1.18
BUB/BnJ f 22369.0 4417.0   7 1669.0 0.197 13153.0, 26226.0 -0.16
BUB/BnJ m 12231.0 2558.0   6 1044.0 0.209 8976.0, 16269.0 -0.62
C3H/HeJ m 11739.0 1902.0   8 673.0 0.162 8396.0, 14500.0 -0.7
C57BL/10J f 38513.0 10402.0   8 3678.0 0.27 24170.0, 53435.0 1.47
C57BL/6J f 23190.0 4013.0   8 1419.0 0.173 17185.0, 28699.0 -0.08
C57BL/6J m 19003.0 4780.0   7 1807.0 0.252 12062.0, 24663.0 0.44
C57BLKS/J f 14266.0 2315.0   8 818.0 0.162 9665.0, 15970.0 -0.98
C57BLKS/J m 15194.0 4639.0   13 1287.0 0.305 8706.0, 22052.0 -0.16
C57BR/cdJ f 34501.0 13625.0   8 4817.0 0.395 14190.0, 52392.0 1.06
C57BR/cdJ m 28373.0 6722.0   6 2744.0 0.237 19703.0, 38042.0 1.9
C57L/J f 16327.0 3366.0   2   2380.0 0.206 13947.0, 18707.0 -0.77
C57L/J m 23503.0 16734.0   7 6325.0 0.712 7088.0, 49356.0 1.14
CAST/EiJ f 30902.0 16789.0   8 5936.0 0.543 15138.0, 68744.0 0.7
CBA/J m 10995.0 1135.0   5 507.0 0.103 9872.0, 12718.0 -0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8970.875 2618.0437 14154.4192 3787.3308
129S1/SvImJ m 8555.625 2618.0437 13739.1692 3372.0808
A/J f 13596.1429 2798.8064 19137.5847 8054.701
A/J m 11847.0 3311.5924 18403.7225 5290.2775
AKR/J f 19538.25 3702.4728 26868.8886 12207.6114
AKR/J m 10254.0 3702.4728 17584.6386 2923.3614
BALB/cByJ f 27418.75 2618.0437 32602.2942 22235.2058
BALB/cByJ m 19073.875 2618.0437 24257.4192 13890.3308
BTBR T+ Itpr3tf/J f 37801.25 3702.4728 45131.8886 30470.6114
BTBR T+ Itpr3tf/J m 23757.5833 2137.6237 27989.9295 19525.2372
BUB/BnJ f 22369.0 2798.8064 27910.4419 16827.5581
BUB/BnJ m 12231.1667 3023.0564 18216.608 6245.7253
C57BL/6J f 23190.125 2618.0437 28373.6692 18006.5808
C57BL/6J m 19002.7143 2798.8064 24544.1562 13461.2724
C57BLKS/J f 14266.375 2618.0437 19449.9192 9082.8308
C57BLKS/J m 15193.6154 2053.7624 19259.922 11127.3087
C57BR/cdJ f 34500.875 2618.0437 39684.4192 29317.3308
C57BR/cdJ m 28372.8333 3023.0564 34358.2747 22387.392
C57L/J f 16327.0 5236.0873 26694.0885 5959.9115
C57L/J m 23503.4286 2798.8064 29044.8704 17961.9867


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8763.25 1851.2364 12428.5693 5097.9307
A/J both 12721.5714 2167.9461 17013.9538 8429.189
AKR/J both 14896.125 2618.0437 20079.6692 9712.5808
BALB/cByJ both 23246.3125 1851.2364 26911.6318 19580.9932
BTBR T+ Itpr3tf/J both 30779.4167 2137.6237 35011.7628 26547.0705
BUB/BnJ both 17300.0833 2059.8657 21378.4741 13221.6925
C57BL/6J both 21096.4196 1916.2117 24890.3855 17302.4537
C57BLKS/J both 14729.9952 1663.7377 18024.0801 11435.9103
C57BR/cdJ both 31436.8542 1999.5639 35395.8515 27477.8569
C57L/J both 19915.2143 2968.5825 25792.801 14037.6276




  GWAS USING LINEAR MIXED MODELS