Project measure / variable:   Jaxpheno2   kidney_R8

ID, description, units MPD:22732   kidney_R8   kidney (right) weight   [g]  at age 8wks  
Data set, strains Jaxpheno2   inbred   11 strains     sex: both     age: 8wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Jaxpheno2 - kidney (right) weight at age 8wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means0.126   g 0.181   g
Median of the strain means0.125   g 0.189   g
SD of the strain means± 0.0145 ± 0.0198
Coefficient of variation (CV)0.115 0.110
Min–max range of strain means0.105   –   0.159   g 0.148   –   0.210   g
Mean sample size per strain7.9   mice 8.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1165 0.1165 26.8577 < 0.0001
strain 10 0.022 0.0022 0.5062 0.884
sex:strain 10 0.0362 0.0036 0.836 0.5946
Residuals 169 0.7328 0.0043


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.129P2-Apoetm1Unc/J f 0.105 0.00719   5 0.00322 0.0682 0.0931, 0.111 -1.48
B6.129P2-Apoetm1Unc/J m 0.148 0.0124   5 0.00555 0.0838 0.134, 0.162 -1.66
B6D2F1/J f 0.133 0.0138   6 0.00563 0.104 0.121, 0.153 0.45
B6D2F1/J m 0.19 0.0143   5 0.00638 0.0753 0.167, 0.201 0.46
BALB/cByJ f 0.134 0.0114   10 0.00361 0.0854 0.118, 0.153 0.52
BALB/cByJ m 0.192 0.0127   10 0.00403 0.0662 0.171, 0.209 0.56
BALB/cJ f 0.123 0.0093   10 0.00294 0.0753 0.114, 0.144 -0.24
BALB/cJ m 0.189 0.0209   10 0.0066 0.111 0.154, 0.226 0.41
C3H/HeJ f 0.127 0.0137   5 0.00611 0.107 0.113, 0.141 0.04
C3H/HeJ m 0.21 0.0139   5 0.00621 0.0662 0.195, 0.229 1.47
C57BL/6J f 0.159 0.219   15 0.0565 1.38 0.0873, 0.949 2.25
C57BL/6J m 0.149 0.0164   15 0.00424 0.11 0.129, 0.187 -1.61
CBA/J f 0.121 0.00888   10 0.00281 0.0734 0.105, 0.134 -0.38
CBA/J m 0.198 0.0108   15 0.00279 0.0548 0.181, 0.211 0.86
DBA/2J f 0.11 0.0166   10 0.00525 0.151 0.0924, 0.15 -1.14
DBA/2J m 0.164 0.0253   15 0.00654 0.155 0.124, 0.202 -0.85
FVB/NJ f 0.136 0.0072   5 0.00322 0.0531 0.125, 0.145 0.66
FVB/NJ m 0.192 0.0188   5 0.00842 0.0978 0.169, 0.212 0.56
NOD.CB17-Prkdcscid/J f 0.118 0.00513   5 0.00229 0.0436 0.11, 0.123 -0.58
NOD.CB17-Prkdcscid/J m 0.181 0.00795   5 0.00356 0.044 0.169, 0.189 0.0
NOD/ShiLtJ f 0.125 0.0148   10 0.00467 0.118 0.108, 0.158 -0.1
NOD/ShiLtJ m 0.177 0.0572   10 0.0181 0.323 0.0258, 0.229 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J f 0.1054 0.0294 0.1636 0.0473
B6.129P2-Apoetm1Unc/J m 0.148 0.0294 0.2061 0.0899
B6D2F1/J f 0.1327 0.0269 0.1857 0.0796
B6D2F1/J m 0.1896 0.0294 0.2477 0.1315
BALB/cByJ f 0.1335 0.0208 0.1746 0.0924
BALB/cByJ m 0.1923 0.0208 0.2334 0.1512
BALB/cJ f 0.1235 0.0208 0.1646 0.0824
BALB/cJ m 0.1889 0.0208 0.23 0.1478
C3H/HeJ f 0.1274 0.0294 0.1855 0.0693
C3H/HeJ m 0.21 0.0294 0.2681 0.1519
C57BL/6J f 0.1587 0.017 0.1922 0.1251
C57BL/6J m 0.1489 0.017 0.1824 0.1153
CBA/J f 0.121 0.0208 0.1621 0.0799
CBA/J m 0.1976 0.017 0.2312 0.164
DBA/2J f 0.1095 0.0208 0.1506 0.0684
DBA/2J m 0.1637 0.017 0.1973 0.1302
FVB/NJ f 0.1356 0.0294 0.1937 0.0775
FVB/NJ m 0.1924 0.0294 0.2505 0.1343
NOD.CB17-Prkdcscid/J f 0.1176 0.0294 0.1757 0.0595
NOD.CB17-Prkdcscid/J m 0.1808 0.0294 0.2389 0.1227
NOD/ShiLtJ f 0.1251 0.0208 0.1662 0.084
NOD/ShiLtJ m 0.1768 0.0208 0.2179 0.1357


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.129P2-Apoetm1Unc/J both 0.1267 0.0208 0.1678 0.0856
B6D2F1/J both 0.1611 0.0199 0.2005 0.1218
BALB/cByJ both 0.1629 0.0147 0.192 0.1338
BALB/cJ both 0.1562 0.0147 0.1853 0.1271
C3H/HeJ both 0.1687 0.0208 0.2098 0.1276
C57BL/6J both 0.1538 0.012 0.1775 0.13
CBA/J both 0.1593 0.0134 0.1858 0.1328
DBA/2J both 0.1366 0.0134 0.1632 0.1101
FVB/NJ both 0.164 0.0208 0.2051 0.1229
NOD.CB17-Prkdcscid/J both 0.1492 0.0208 0.1903 0.1081
NOD/ShiLtJ both 0.1509 0.0147 0.18 0.1219




  GWAS USING LINEAR MIXED MODELS