MPD: Data set: Jaxpheno2

Jaxpheno2 downloads
• Download Jaxpheno2 project data set animal data, as uploaded
• Download Jaxpheno2 animal data matrix with factor-related expansion applied as necessary
• Download Jaxpheno2 strain means, SD, N, etc. one row per strain/sex/measure

Ontology terms mapped to Jaxpheno2 measures:

MA:0000072 heart
MA:0000141 spleen
MA:0000168 brain
MA:0000358 liver
MA:0000368 kidney
MP:0000771 abnormal brain size
MP:0001259 abnormal body weight
MP:0002707 abnormal kidney weight
MP:0004847 abnormal liver weight
MP:0004857 abnormal heart weight
MP:0004951 abnormal spleen weight
VT:0000689 spleen morphology trait
VT:0001259 body mass
VT:0002176 brain mass
VT:0002707 kidney mass
VT:0003402 liver mass
VT:0004951 spleen mass
VT:0007028 heart mass

Institutional authorship	Jackson Laboratory
Investigators	James Denegre The Jackson Laboratory, Bar Harbor, ME
Participants	Denegre J
Contact	James Denegre james.denegre@jax.org
Affiliated Center	JAX Phenotyping Center
Project type	Phenotype strain survey data set
MPD identifiers	Jaxpheno2 MPD:227
Data changelog	1 update/correction. Initial release date: 05/2007.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

Procedures conducted:

• organ weights		Brain, heart, kidney, liver, spleen weights.
• body weight

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Sample Size (Avg)
Jaxpheno2:1	Jaxpheno2	organ weights	(none)	brain weight [g] brain 22701 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:3	Jaxpheno2	organ weights	(none)	brain weight as percentage of body weight [%] pct_brain 22703 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:10	Jaxpheno2	organ weights	(none)	heart weight [g] heart 22710 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:12	Jaxpheno2	organ weights	(none)	heart weight as percentage of body weight [%] pct_heart 22712 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:20	Jaxpheno2	organ weights	(none)	liver weight [g] liver 22720 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:22	Jaxpheno2	organ weights	(none)	liver weight as percentage of body weight [%] pct_liver 22722 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:30	Jaxpheno2	organ weights	(none)	kidney (left) weight [g] kidney_L 22730 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:32	Jaxpheno2	organ weights	(none)	kidney (right) weight [g] kidney_R 22732 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:34	Jaxpheno2	organ weights	(none)	kidney (left) weight, as percentage of body weight [%] pct_kidney_L 22734 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:36	Jaxpheno2	organ weights	(none)	kidney (right) weight, as percentage of body weight [%] pct_kidney_R 22736 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:40	Jaxpheno2	organ weights	(none)	spleen weight [g] spleen 22740 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:42	Jaxpheno2	organ weights	(none)	spleen weight, as percentage of body weight [%] pct_spleen 22742 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2:50	Jaxpheno2	body weight	(none)	body weight [g] bw 22750 age 8wks age 16wks	inbred	11	both	N=8

Jaxpheno2: Morphometric (organ weight) survey of 11 strains of mice (2006)