Project measure / variable:   Crabbe5   err_base_D2

ID, description, units MPD:19604   err_base_D2   motor incoordination, errors over distance traveled, 1.6mm rod, 6mm space   [n/cm]  control (day 2)  
ethanol study
Data set, strains Crabbe5   inbred   8 strains     sex: both     age: 7-14wks
Procedure parallel rod floor test
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  STRAIN COMPARISON PLOT
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Crabbe5 - motor incoordination, errors over distance traveled, 1.6mm rod, 6mm space control (day 2)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains8 strains
Mean of the strain means2.30   n/cm 3.33   n/cm
Median of the strain means2.66   n/cm 1.93   n/cm
SD of the strain means± 0.911 ± 2.87
Coefficient of variation (CV)0.396 0.864
Min–max range of strain means0.377   –   3.10   n/cm 1.07   –   9.65   n/cm
Mean sample size per strain5.6   mice 5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.9906 0.9906 0.1634 0.6874
strain 6 58.696 9.7827 1.6138 0.1578
sex:strain 6 40.5224 6.7537 1.1141 0.3641
Residuals 64 387.9658 6.062


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.377 0.362   6 0.148 0.961 -2.11
129S1/SvImJ m 1.07 0.562   6 0.229 0.522 0.38, 1.88 -0.79
A/J f 2.04 1.35   6 0.551 0.664 -0.28
A/J m 3.71 4.06   6 1.66 1.1 0.48, 11.3 0.13
BALB/cByJ f 3.1 4.33   3 2.5 1.4 0.5, 8.1 0.88
BALB/cByJ m 1.38 1.08   6 0.44 0.78 0.41, 3.32 -0.68
BTBR T+ Itpr3tf/J f 2.71 2.13   6 0.87 0.786 0.9, 6.25 0.45
BTBR T+ Itpr3tf/J m 1.93 1.08   5 0.483 0.56 0.84, 3.66 -0.49
C3H/HeJ f 2.38 0.91   6 0.372 0.383 1.02, 3.42 0.09
C3H/HeJ m 5.02 5.67   6 2.31 1.13 1.16, 15.3 0.59
C57BL/6J f 2.66 2.01   6 0.821 0.756 0.5, 5.23 0.4
C57BL/6J m 1.93 1.46   6 0.595 0.753 0.87, 4.45 -0.49
DBA/2J f 2.82 1.76   6 0.718 0.623 0.74, 5.88 0.57
DBA/2J m 1.92 2.03   4 1.02 1.06 0.41, 4.71 -0.49
FVB/NJ m 9.65 8.17   6 3.34 0.847 1.38, 20.3 2.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.3767 1.0052 2.3847 0.0
129S1/SvImJ m 1.075 1.0052 3.083 0.0
A/J f 2.035 1.0052 4.043 0.027
A/J m 3.7083 1.0052 5.7164 1.7003
BALB/cByJ f 3.1 1.4215 5.9398 0.2602
BALB/cByJ m 1.3817 1.0052 3.3897 0.0
BTBR T+ Itpr3tf/J f 2.7117 1.0052 4.7197 0.7036
BTBR T+ Itpr3tf/J m 1.928 1.1011 4.1277 0.0
C3H/HeJ f 2.38 1.0052 4.388 0.372
C3H/HeJ m 5.0183 1.0052 7.0264 3.0103
C57BL/6J f 2.66 1.0052 4.668 0.652
C57BL/6J m 1.935 1.0052 3.943 0.0
DBA/2J f 2.8233 1.0052 4.8314 0.8153
DBA/2J m 1.915 1.2311 4.3743 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.7258 0.7107 2.1457 0.0
A/J both 2.8717 0.7107 4.2916 1.4518
BALB/cByJ both 2.2408 0.8705 3.9798 0.5018
BTBR T+ Itpr3tf/J both 2.3198 0.7454 3.809 0.8306
C3H/HeJ both 3.6992 0.7107 5.1191 2.2793
C57BL/6J both 2.2975 0.7107 3.7174 0.8776
DBA/2J both 2.3692 0.7946 3.9566 0.7817




  GWAS USING LINEAR MIXED MODELS