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Project measure / variable:   Crabbe5   err_base_D1

ID, description, units MPD:19603   err_base_D1   motor incoordination, errors over distance traveled, 1.6mm rod, 6mm space   [n/cm]  control (day 1)  
ethanol study
Data set, strains Crabbe5   inbred   8 strains     sex: both     age: 7-14wks
Procedure parallel rod floor test
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  STRAIN COMPARISON PLOT
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Crabbe5 - motor incoordination, errors over distance traveled, 1.6mm rod, 6mm space control (day 1)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains8 strains
Mean of the strain means2.18   n/cm 2.13   n/cm
Median of the strain means2.00   n/cm 2.16   n/cm
SD of the strain means± 1.38 ± 0.829
Coefficient of variation (CV)0.632 0.390
Min–max range of strain means0.700   –   4.68   n/cm 1.12   –   3.33   n/cm
Mean sample size per strain5.6   mice 5.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.7179 1.7179 0.3289 0.5683
strain 6 75.6808 12.6135 2.415 0.0365
sex:strain 6 8.446 1.4077 0.2695 0.9492
Residuals 63 329.0483 5.223


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.7 1.01   6 0.413 1.44 -1.07
129S1/SvImJ m 1.12 0.992   5 0.444 0.889 0.41, 2.85 -1.22
A/J f 4.68 5.44   6 2.22 1.16 0.78, 14.5 1.81
A/J m 3.33 3.51   6 1.43 1.05 0.37, 9.94 1.45
BALB/cByJ f 0.82 0.197   3 0.114 0.24 0.64, 1.03 -0.99
BALB/cByJ m 1.25 0.923   6 0.377 0.736 0.26, 2.58 -1.06
BTBR T+ Itpr3tf/J f 2.87 2.92   6 1.19 1.02 0.52, 7.39 0.5
BTBR T+ Itpr3tf/J m 1.96 1.48   5 0.663 0.756 0.68, 4.15 -0.2
C3H/HeJ f 2.66 2.41   6 0.986 0.908 0.52, 7.28 0.35
C3H/HeJ m 2.35 0.694   6 0.283 0.295 1.53, 3.57 0.27
C57BL/6J f 1.55 0.837   6 0.342 0.541 0.37, 2.68 -0.46
C57BL/6J m 1.44 1.23   6 0.502 0.854 0.45, 3.73 -0.83
DBA/2J f 2.0 1.08   6 0.442 0.542 0.73, 3.99 -0.13
DBA/2J m 2.5 1.45   4 0.723 0.579 1.64, 4.66 0.45
FVB/NJ m 3.07 2.69   6 1.1 0.877 1.11, 8.43 1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.7 0.933 2.5645 0.0
129S1/SvImJ m 1.116 1.0221 3.1584 0.0
A/J f 4.685 0.933 6.5495 2.8205
A/J m 3.325 0.933 5.1895 1.4605
BALB/cByJ f 0.82 1.3195 3.4567 0.0
BALB/cByJ m 1.2533 0.933 3.1178 0.0
BTBR T+ Itpr3tf/J f 2.8683 0.933 4.7328 1.0039
BTBR T+ Itpr3tf/J m 1.96 1.0221 4.0024 0.0
C3H/HeJ f 2.66 0.933 4.5245 0.7955
C3H/HeJ m 2.3483 0.933 4.2128 0.4839
C57BL/6J f 1.5467 0.933 3.4111 0.0
C57BL/6J m 1.4383 0.933 3.3028 0.0
DBA/2J f 1.9967 0.933 3.8611 0.1322
DBA/2J m 2.4975 1.1427 4.781 0.214


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.908 0.6919 2.2907 0.0
A/J both 4.005 0.6597 5.3234 2.6866
BALB/cByJ both 1.0367 0.808 2.6513 0.0
BTBR T+ Itpr3tf/J both 2.4142 0.6919 3.7969 1.0314
C3H/HeJ both 2.5042 0.6597 3.8225 1.1858
C57BL/6J both 1.4925 0.6597 2.8109 0.1741
DBA/2J both 2.2471 0.7376 3.7211 0.7731




  GWAS USING LINEAR MIXED MODELS