Project measure / variable:   Crabbe4   latency_dowel9_5_30

ID, description, units MPD:19103   latency_dowel9_5_30   latency to fall, 30 min post-injection   [s]  dowel width 9.5 mm  
ethanol study
Data set, strains Crabbe4   inbred   8 strains     sex: both     age: 12-16wks
Procedure dowel balance test
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  STRAIN COMPARISON PLOT
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Crabbe4 - latency to fall, 30 min post-injection dowel width 9.5 mm



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means57.1   s 30.4   s
Median of the strain means37.1   s 17.4   s
SD of the strain means± 51.7 ± 36.1
Coefficient of variation (CV)0.906 1.19
Min–max range of strain means8.33   –   129   s 8.00   –   113   s
Mean sample size per strain3.5   mice 3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12453.9571 12453.9571 1.9457 0.1709
strain 7 40904.7467 5843.5352 0.9129 0.5068
sex:strain 7 52098.7917 7442.6845 1.1628 0.346
Residuals 39 249634.25 6400.8782


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 13.2 1.89   4 0.946 0.143 12.0, 16.0 -0.85
129S1/SvImJ m 50.0 57.4   4 28.7 1.15 17.0, 136.0 0.54
A/J f 54.2 68.1   4 34.1 1.26 9.0, 154.0 -0.06
A/J m 113.0 162.0   3 93.7 1.44 17.0, 300.0 2.29
BALB/cByJ f 107.0 167.0   3 96.5 1.56 7.0, 300.0 0.97
BALB/cByJ m 19.7 15.0   3 8.65 0.762 3.0, 32.0 -0.3
BTBR T+ Itpr3tf/J f 8.33 4.93   3 2.85 0.592 5.0, 14.0 -0.94
BTBR T+ Itpr3tf/J m 8.0 4.0   3 2.31 0.5 4.0, 12.0 -0.62
C3H/HeJ f 114.0 132.0   4 66.1 1.16 12.0, 300.0 1.1
C3H/HeJ m 20.0 9.13   4 4.56 0.456 7.0, 28.0 -0.29
C57BL/6J f 20.0 21.5   4 10.7 1.07 7.0, 52.0 -0.72
C57BL/6J m 9.0 4.08   4 2.04 0.454 6.0, 15.0 -0.59
DBA/2J f 129.0 144.0   4 71.9 1.12 4.0, 300.0 1.39
DBA/2J m 15.2 14.2   4 7.11 0.933 6.0, 36.0 -0.42
FVB/NJ f 11.0 5.66   2   4.0 0.514 7.0, 15.0 -0.89
FVB/NJ m 8.5 3.54   2   2.5 0.416 6.0, 11.0 -0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 13.25 40.0027 94.1632 0.0
129S1/SvImJ m 50.0 40.0027 130.9132 0.0
A/J f 54.25 40.0027 135.1632 0.0
A/J m 112.6667 46.1912 206.0972 19.2362
BALB/cByJ f 107.0 46.1912 200.4305 13.5695
BALB/cByJ m 19.6667 46.1912 113.0972 0.0
BTBR T+ Itpr3tf/J f 8.3333 46.1912 101.7638 0.0
BTBR T+ Itpr3tf/J m 8.0 46.1912 101.4305 0.0
C3H/HeJ f 113.75 40.0027 194.6632 32.8368
C3H/HeJ m 20.0 40.0027 100.9132 0.0
C57BL/6J f 20.0 40.0027 100.9132 0.0
C57BL/6J m 9.0 40.0027 89.9132 0.0
DBA/2J f 128.75 40.0027 209.6632 47.8368
DBA/2J m 15.25 40.0027 96.1632 0.0
FVB/NJ f 11.0 56.5724 125.4285 0.0
FVB/NJ m 8.5 56.5724 122.9285 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 31.625 28.2862 88.8393 0.0
A/J both 83.4583 30.5526 145.2568 21.6599
BALB/cByJ both 63.3333 32.6621 129.3987 0.0
BTBR T+ Itpr3tf/J both 8.1667 32.6621 74.232 0.0
C3H/HeJ both 66.875 28.2862 124.0893 9.6607
C57BL/6J both 14.5 28.2862 71.7143 0.0
DBA/2J both 72.0 28.2862 129.2143 14.7857
FVB/NJ both 9.75 40.0027 90.6632 0.0




  GWAS USING LINEAR MIXED MODELS