Project measure / variable:   Crabbe4   latency_dowel9_5_0

ID, description, units MPD:19102   latency_dowel9_5_0   latency to fall, 0 min post-injection   [s]  dowel width 9.5 mm  
ethanol study
Data set, strains Crabbe4   inbred   8 strains     sex: both     age: 12-16wks
Procedure dowel balance test
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  STRAIN COMPARISON PLOT
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Crabbe4 - latency to fall, 0 min post-injection dowel width 9.5 mm



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means92.3   s 83.7   s
Median of the strain means86.7   s 81.8   s
SD of the strain means± 39.4 ± 38.3
Coefficient of variation (CV)0.427 0.457
Min–max range of strain means29.7   –   155   s 28.0   –   149   s
Mean sample size per strain3.5   mice 3.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1278.8183 1278.8183 0.822 0.3702
strain 7 59391.3522 8484.4789 5.4534 0.0002
sex:strain 7 8050.1901 1150.0272 0.7392 0.6403
Residuals 39 60677.1667 1555.8248


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 81.0 9.13   4 4.56 0.113 70.0, 89.0 -0.29
129S1/SvImJ m 93.0 9.27   4 4.64 0.0997 80.0, 102.0 0.24
A/J f 155.0 96.8   4 48.4 0.624 101.0, 300.0 1.59
A/J m 98.7 16.7   3 9.67 0.17 89.0, 118.0 0.39
BALB/cByJ f 140.0 20.2   3 11.7 0.144 122.0, 162.0 1.21
BALB/cByJ m 149.0 48.3   3 27.9 0.325 104.0, 200.0 1.71
BTBR T+ Itpr3tf/J f 29.7 46.2   3 26.7 1.56 2.0, 83.0 -1.59
BTBR T+ Itpr3tf/J m 28.0 27.5   3 15.9 0.982 4.0, 58.0 -1.45
C3H/HeJ f 87.2 30.6   4 15.3 0.35 45.0, 116.0 -0.13
C3H/HeJ m 70.5 37.8   4 18.9 0.537 15.0, 100.0 -0.34
C57BL/6J f 90.8 15.3   4 7.63 0.168 74.0, 111.0 -0.04
C57BL/6J m 115.0 53.6   4 26.8 0.467 64.0, 176.0 0.82
DBA/2J f 86.2 13.8   4 6.92 0.16 79.0, 107.0 -0.15
DBA/2J m 62.0 29.2   4 14.6 0.471 27.0, 92.0 -0.57
FVB/NJ f 68.5 19.1   2   13.5 0.279 55.0, 82.0 -0.6
FVB/NJ m 53.0 18.4   2   13.0 0.347 40.0, 66.0 -0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 81.0 19.722 120.8915 41.1085
129S1/SvImJ m 93.0 19.722 132.8915 53.1085
A/J f 155.0 19.722 194.8915 115.1085
A/J m 98.6667 22.773 144.7294 52.604
BALB/cByJ f 140.3333 22.773 186.396 94.2706
BALB/cByJ m 148.6667 22.773 194.7294 102.604
BTBR T+ Itpr3tf/J f 29.6667 22.773 75.7294 0.0
BTBR T+ Itpr3tf/J m 28.0 22.773 74.0627 0.0
C3H/HeJ f 87.25 19.722 127.1415 47.3585
C3H/HeJ m 70.5 19.722 110.3915 30.6085
C57BL/6J f 90.75 19.722 130.6415 50.8585
C57BL/6J m 114.75 19.722 154.6415 74.8585
DBA/2J f 86.25 19.722 126.1415 46.3585
DBA/2J m 62.0 19.722 101.8915 22.1085
FVB/NJ f 68.5 27.8911 124.915 12.085
FVB/NJ m 53.0 27.8911 109.415 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 87.0 13.9455 115.2075 58.7925
A/J both 126.8333 15.0629 157.3009 96.3657
BALB/cByJ both 144.5 16.1029 177.0712 111.9288
BTBR T+ Itpr3tf/J both 28.8333 16.1029 61.4046 0.0
C3H/HeJ both 78.875 13.9455 107.0825 50.6675
C57BL/6J both 102.75 13.9455 130.9575 74.5425
DBA/2J both 74.125 13.9455 102.3325 45.9175
FVB/NJ both 60.75 19.722 100.6415 20.8585




  GWAS USING LINEAR MIXED MODELS