Project measure / variable:   Cheverud1   kidneywt_adj_hifat

ID, description, units MPD:17870   kidneywt_adj_hifat   kidney weight (both) as percentage of body weight   [%]  high-fat diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   17 strains     sex: both     age: 20-30wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - kidney weight (both) as percentage of body weight high-fat diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means0.959   % 1.30   %
Median of the strain means0.927   % 1.20   %
SD of the strain means± 0.169 ± 0.205
Coefficient of variation (CV)0.176 0.158
Min–max range of strain means0.658   –   1.27   % 1.10   –   1.76   %
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.1628 7.1628 147.5929 < 0.0001
strain 15 6.9743 0.465 9.5805 < 0.0001
sex:strain 15 1.1135 0.0742 1.5296 0.096
Residuals 225 10.9194 0.0485


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 0.906 0.219   9 0.0731 0.242 0.57, 1.21 -0.31
LGXSM10 m 1.38 0.227   10 0.0719 0.164 1.08, 1.8 0.41
LGXSM15 f 0.892 0.174   9 0.0578 0.195 0.61, 1.13 -0.4
LGXSM15 m 1.27 0.302   11 0.0911 0.237 0.94, 1.89 -0.13
LGXSM18 f 0.926 0.0987   8 0.0349 0.107 0.77, 1.06 -0.2
LGXSM18 m 1.16 0.269   8 0.0951 0.233 0.78, 1.7 -0.66
LGXSM19 f 0.901 0.225   9 0.075 0.25 0.65, 1.24 -0.34
LGXSM19 m 1.12 0.11   8 0.0389 0.0978 0.92, 1.28 -0.86
LGXSM20 f 1.19 0.141   8 0.0499 0.119 0.99, 1.45 1.37
LGXSM20 m 1.76 0.152   6 0.0621 0.0862 1.58, 2.02 2.27
LGXSM22 f 0.699 0.139   13 0.0387 0.199 0.46, 0.95 -1.54
LGXSM22 m 1.18 0.177   12 0.0512 0.15 0.82, 1.49 -0.57
LGXSM23 f 0.929 0.329   8 0.116 0.355 0.72, 1.61 -0.18
LGXSM23 m 1.16 0.295   8 0.104 0.254 0.82, 1.77 -0.66
LGXSM31 f 0.658 0.114   5 0.0508 0.173 0.55, 0.79 -1.78
LGXSM31 m 1.1 0.193   6 0.0787 0.176 0.84, 1.29 -0.96
LGXSM33 f 0.874 0.148   8 0.0522 0.169 0.62, 1.06 -0.5
LGXSM33 m 1.22 0.142   7 0.0537 0.116 1.0, 1.41 -0.37
LGXSM35 f 1.11 0.186   7 0.0702 0.167 0.88, 1.34 0.89
LGXSM35 m 1.18 0.151   8 0.0532 0.127 0.98, 1.44 -0.57
LGXSM39 f 1.27 0.232   8 0.0819 0.183 0.76, 1.53 1.84
LGXSM39 m 1.76 0.475   9 0.158 0.27 1.07, 2.34 2.27
LGXSM4 f 1.0 0.11   8 0.039 0.11 0.85, 1.2 0.24
LGXSM4 m 1.19 0.204   6 0.0832 0.171 1.0, 1.57 -0.52
LGXSM45 f 1.22 0.186   5 0.0833 0.153 1.05, 1.51 1.55
LGXSM45 m 1.54 0.159   3 0.0921 0.103 1.36, 1.65 1.19
LGXSM46 f 0.958 0.225   9 0.0752 0.235 0.64, 1.28 -0.01
LGXSM46 m 1.19 0.196   10 0.062 0.165 0.98, 1.51 -0.52
LGXSM48 f 0.883 0.312   7 0.118 0.354 0.57, 1.47 -0.45
LGXSM48 m 1.2 0.258   8 0.0912 0.215 0.98, 1.8 -0.47
LGXSM5 f 0.929 0.149   8 0.0527 0.16 0.72, 1.11 -0.18
LGXSM5 m 1.28 0.144   8 0.051 0.113 1.07, 1.48 -0.08
SM/J m 1.34 0.178   6 0.0725 0.132 1.12, 1.63 0.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 0.9056 0.0734 1.0503 0.7609
LGXSM10 m 1.384 0.0697 1.5213 1.2467
LGXSM15 f 0.8922 0.0734 1.0369 0.7475
LGXSM15 m 1.2745 0.0664 1.4054 1.1437
LGXSM18 f 0.9262 0.0779 1.0797 0.7728
LGXSM18 m 1.1563 0.0779 1.3097 1.0028
LGXSM19 f 0.9011 0.0734 1.0458 0.7564
LGXSM19 m 1.125 0.0779 1.2785 0.9715
LGXSM20 f 1.1912 0.0779 1.3447 1.0378
LGXSM20 m 1.765 0.0899 1.9422 1.5878
LGXSM22 f 0.6992 0.0611 0.8196 0.5788
LGXSM22 m 1.185 0.0636 1.3103 1.0597
LGXSM23 f 0.9287 0.0779 1.0822 0.7753
LGXSM23 m 1.1625 0.0779 1.316 1.009
LGXSM31 f 0.658 0.0985 0.8521 0.4639
LGXSM31 m 1.0967 0.0899 1.2739 0.9194
LGXSM33 f 0.8738 0.0779 1.0272 0.7203
LGXSM33 m 1.2229 0.0833 1.3869 1.0588
LGXSM35 f 1.1143 0.0833 1.2784 0.9502
LGXSM35 m 1.1838 0.0779 1.3372 1.0303
LGXSM39 f 1.2688 0.0779 1.4222 1.1153
LGXSM39 m 1.7611 0.0734 1.9058 1.6164
LGXSM4 f 1.005 0.0779 1.1585 0.8515
LGXSM4 m 1.19 0.0899 1.3672 1.0128
LGXSM45 f 1.218 0.0985 1.4121 1.0239
LGXSM45 m 1.5433 0.1272 1.794 1.2927
LGXSM46 f 0.9578 0.0734 1.1025 0.8131
LGXSM46 m 1.186 0.0697 1.3233 1.0487
LGXSM48 f 0.8829 0.0833 1.0469 0.7188
LGXSM48 m 1.1975 0.0779 1.351 1.044
LGXSM5 f 0.9288 0.0779 1.0822 0.7753
LGXSM5 m 1.28 0.0779 1.4335 1.1265


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 1.1448 0.0506 1.2445 1.045
LGXSM15 both 1.0834 0.0495 1.1809 0.9858
LGXSM18 both 1.0413 0.0551 1.1498 0.9327
LGXSM19 both 1.0131 0.0535 1.1185 0.9076
LGXSM20 both 1.4781 0.0595 1.5953 1.3609
LGXSM22 both 0.9421 0.0441 1.029 0.8552
LGXSM23 both 1.0456 0.0551 1.1542 0.9371
LGXSM31 both 0.8773 0.0667 1.0088 0.7459
LGXSM33 both 1.0483 0.057 1.1606 0.936
LGXSM35 both 1.149 0.057 1.2614 1.0367
LGXSM39 both 1.5149 0.0535 1.6204 1.4095
LGXSM4 both 1.0975 0.0595 1.2147 0.9803
LGXSM45 both 1.3807 0.0804 1.5392 1.2222
LGXSM46 both 1.0719 0.0506 1.1716 0.9722
LGXSM48 both 1.0402 0.057 1.1525 0.9278
LGXSM5 both 1.1044 0.0551 1.2129 0.9958




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA