Project measure / variable:   Cheverud1   TG_ctrl

ID, description, units MPD:17844   TG_ctrl   triglycerides (serum TG, 4h fast)   [mg/dL]  control diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   15 strains     sex: both     age: 20-30wks
Procedure lipid profile
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  STRAIN COMPARISON PLOT
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Cheverud1 - triglycerides (serum TG, 4h fast) control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains15 strains
Mean of the strain means77.4   mg/dL 73.2   mg/dL
Median of the strain means72.2   mg/dL 73.5   mg/dL
SD of the strain means± 22.8 ± 13.3
Coefficient of variation (CV)0.294 0.182
Min–max range of strain means43.2   –   138   mg/dL 54.5   –   95.8   mg/dL
Mean sample size per strain7.8   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 797.4835 797.4835 0.5703 0.4511
strain 13 40677.2702 3129.0208 2.2375 0.0096
sex:strain 13 23638.6869 1818.3605 1.3003 0.2157
Residuals 187 261510.5616 1398.4522


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 87.3 29.9   7 11.3 0.343 23.9, 115.0 0.44
LGXSM10 m 67.8 44.9   7 17.0 0.662 19.1, 145.0 -0.4
LGXSM15 f 57.9 23.3   9 7.75 0.402 5.48, 90.6 -0.86
LGXSM15 m 63.2 30.5   10 9.66 0.483 9.5, 107.0 -0.75
LGXSM18 f 75.7 45.0   8 15.9 0.595 7.89, 139.0 -0.07
LGXSM18 m 80.5 36.2   7 13.7 0.45 38.0, 141.0 0.55
LGXSM19 f 68.1 40.4   8 14.3 0.594 26.7, 147.0 -0.41
LGXSM19 m 83.7 59.2   8 20.9 0.707 7.89, 194.0 0.79
LGXSM20 f 138.0 44.8   6 18.3 0.325 72.8, 208.0 2.66
LGXSM20 m 88.3 29.8   7 11.3 0.338 57.4, 151.0 1.14
LGXSM22 f 64.7 32.9   12 9.49 0.508 16.7, 142.0 -0.56
LGXSM22 m 73.5 66.0   7 24.9 0.898 8.69, 188.0 0.03
LGXSM23 f 60.2 27.3   9 9.1 0.454 10.9, 83.9 -0.75
LGXSM23 m 54.5 35.7   11 10.8 0.656 3.88, 132.0 -1.4
LGXSM31 m 57.0 28.8   4 14.4 0.507 24.4, 93.4 -1.21
LGXSM33 f 88.6 26.5   9 8.83 0.299 52.1, 141.0 0.49
LGXSM33 m 55.5 22.2   11 6.7 0.401 7.09, 77.8 -1.33
LGXSM38 f 96.5 39.3   8 13.9 0.407 27.9, 141.0 0.84
LGXSM38 m 61.3 29.2   6 11.9 0.477 21.5, 96.1 -0.89
LGXSM4 f 43.2 14.1   7 5.35 0.328 25.2, 67.4 -1.5
LGXSM4 m 67.1 48.1   8 17.0 0.716 21.3, 171.0 -0.45
LGXSM45 f 68.6 10.5   3 6.04 0.153 57.8, 78.7 -0.39
LGXSM45 m 88.8 64.0   3 37.0 0.721 35.9, 160.0 1.18
LGXSM46 f 89.7 52.7   8 18.6 0.588 19.9, 196.0 0.54
LGXSM46 m 95.8 27.6   9 9.19 0.288 61.3, 129.0 1.7
LGXSM48 f 65.3 28.2   6 11.5 0.432 31.6, 99.8 -0.53
LGXSM48 m 81.7 40.2   7 15.2 0.492 48.7, 143.0 0.64
LGXSM5 f 79.3 26.6   8 9.41 0.336 22.4, 108.0 0.09
LGXSM5 m 78.6 33.3   6 13.6 0.424 40.9, 141.0 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 87.3143 14.1343 115.1975 59.4311
LGXSM10 m 67.7714 14.1343 95.6546 39.8882
LGXSM15 f 57.8978 12.4653 82.4885 33.3071
LGXSM15 m 63.21 11.8256 86.5388 39.8812
LGXSM18 f 75.6738 13.2214 101.7561 49.5914
LGXSM18 m 80.5143 14.1343 108.3975 52.6311
LGXSM19 f 68.0875 13.2214 94.1698 42.0052
LGXSM19 m 83.7488 13.2214 109.8311 57.6664
LGXSM20 f 137.8 15.2668 167.9173 107.6827
LGXSM20 m 88.3429 14.1343 116.2261 60.4597
LGXSM22 f 64.6583 10.7953 85.9545 43.3622
LGXSM22 m 73.4557 14.1343 101.3389 45.5725
LGXSM23 f 60.1889 12.4653 84.7796 35.5982
LGXSM23 m 54.4618 11.2753 76.7049 32.2187
LGXSM33 f 88.5556 12.4653 113.1462 63.9649
LGXSM33 m 55.4627 11.2753 77.7058 33.2196
LGXSM38 f 96.45 13.2214 122.5323 70.3677
LGXSM38 m 61.2833 15.2668 91.4006 31.166
LGXSM4 f 43.1571 14.1343 71.0403 15.2739
LGXSM4 m 67.125 13.2214 93.2073 41.0427
LGXSM45 f 68.6 21.5905 111.1923 26.0077
LGXSM45 m 88.8333 21.5905 131.4256 46.241
LGXSM46 f 89.725 13.2214 115.8073 63.6427
LGXSM46 m 95.8333 12.4653 120.424 71.2427
LGXSM48 f 65.3333 15.2668 95.4506 35.216
LGXSM48 m 81.7143 14.1343 109.5975 53.8311
LGXSM5 f 79.3 13.2214 105.3823 53.2177
LGXSM5 m 78.5667 15.2668 108.684 48.4494


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 77.5429 9.9945 97.2593 57.8265
LGXSM15 both 60.5539 8.5911 77.5018 43.6059
LGXSM18 both 78.094 9.6771 97.1843 59.0037
LGXSM19 both 75.9181 9.349 94.3611 57.4751
LGXSM20 both 113.0714 10.4026 133.5929 92.5499
LGXSM22 both 69.057 8.8926 86.5998 51.5142
LGXSM23 both 57.3254 8.4041 73.9044 40.7463
LGXSM33 both 72.0091 8.4041 88.5882 55.4301
LGXSM38 both 78.8667 10.098 98.7874 58.9459
LGXSM4 both 55.1411 9.6771 74.2314 36.0507
LGXSM45 both 78.7167 15.2668 108.834 48.5994
LGXSM46 both 92.7792 9.0856 110.7025 74.8558
LGXSM48 both 73.5238 10.4026 94.0453 53.0023
LGXSM5 both 78.9333 10.098 98.8541 59.0126




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA