Project measure / variable:   Cheverud1   kidneywt_adj_ctrl

ID, description, units MPD:17820   kidneywt_adj_ctrl   kidney weight (both) as percentage of body weight   [%]  control diet  
high-fat diet study
Data set, strains Cheverud1   LGXSM w/par   16 strains     sex: both     age: 20-30wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Cheverud1 - kidney weight (both) as percentage of body weight control diet



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means1.11   % 1.56   %
Median of the strain means1.09   % 1.46   %
SD of the strain means± 0.223 ± 0.309
Coefficient of variation (CV)0.200 0.198
Min–max range of strain means0.709   –   1.55   % 1.29   –   2.38   %
Mean sample size per strain8.4   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12.3368 12.3368 176.9115 < 0.0001
strain 15 13.5289 0.9019 12.9338 < 0.0001
sex:strain 15 3.427 0.2285 3.2762 0.0001
Residuals 226 15.7599 0.0697


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
LGXSM10 f 0.99 0.0802   7 0.0303 0.081 0.89, 1.13 -0.55
LGXSM10 m 1.79 0.149   8 0.0525 0.0832 1.54, 1.96 0.74
LGXSM15 f 1.03 0.175   9 0.0584 0.17 0.76, 1.23 -0.37
LGXSM15 m 1.42 0.189   11 0.057 0.133 1.21, 1.74 -0.46
LGXSM18 f 1.12 0.179   9 0.0597 0.16 0.79, 1.41 0.03
LGXSM18 m 1.46 0.275   8 0.0973 0.189 1.08, 1.98 -0.33
LGXSM19 f 0.86 0.176   8 0.0621 0.204 0.67, 1.16 -1.13
LGXSM19 m 1.29 0.241   9 0.0803 0.187 1.04, 1.88 -0.88
LGXSM20 f 1.38 0.348   8 0.123 0.252 0.87, 1.91 1.2
LGXSM20 m 2.12 0.171   7 0.0647 0.0807 1.81, 2.36 1.81
LGXSM22 f 0.709 0.191   12 0.0552 0.269 0.5, 1.17 -1.81
LGXSM22 m 1.61 0.503   8 0.178 0.312 1.14, 2.71 0.16
LGXSM23 f 0.987 0.32   10 0.101 0.324 0.59, 1.49 -0.56
LGXSM23 m 1.3 0.392   13 0.109 0.301 0.99, 2.46 -0.85
LGXSM31 f 1.12 0.127   3 0.0731 0.113 1.01, 1.26 0.03
LGXSM31 m 1.34 0.136   4 0.0679 0.101 1.14, 1.44 -0.72
LGXSM33 f 1.04 0.157   8 0.0555 0.151 0.84, 1.3 -0.32
LGXSM33 m 1.56 0.187   5 0.0836 0.12 1.31, 1.78 -0.01
LGXSM35 f 1.15 0.0745   8 0.0263 0.0647 1.05, 1.24 0.17
LGXSM35 m 1.42 0.204   10 0.0646 0.144 1.15, 1.71 -0.46
LGXSM39 f 1.55 0.468   10 0.148 0.302 1.1, 2.4 1.96
LGXSM39 m 2.38 0.521   7 0.197 0.219 1.39, 2.84 2.65
LGXSM4 f 1.09 0.213   8 0.0755 0.196 0.66, 1.39 -0.1
LGXSM4 m 1.3 0.135   8 0.0478 0.104 1.08, 1.48 -0.85
LGXSM45 f 1.55 0.107   5 0.0478 0.069 1.41, 1.66 1.96
LGXSM45 m 1.72 0.243   3 0.14 0.141 1.52, 1.99 0.51
LGXSM46 f 1.09 0.285   9 0.0949 0.26 0.64, 1.62 -0.1
LGXSM46 m 1.47 0.188   11 0.0568 0.128 1.11, 1.72 -0.3
LGXSM48 f 1.15 0.226   10 0.0714 0.197 0.8, 1.52 0.17
LGXSM48 m 1.36 0.33   8 0.117 0.243 0.86, 1.95 -0.65
LGXSM5 f 0.98 0.146   8 0.0517 0.149 0.78, 1.2 -0.59
LGXSM5 m 1.45 0.166   6 0.0678 0.114 1.25, 1.68 -0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 f 0.99 0.0998 1.1867 0.7933
LGXSM10 m 1.785 0.0934 1.969 1.601
LGXSM15 f 1.03 0.088 1.2035 0.8565
LGXSM15 m 1.4182 0.0796 1.5751 1.2613
LGXSM18 f 1.1167 0.088 1.2901 0.9432
LGXSM18 m 1.455 0.0934 1.639 1.271
LGXSM19 f 0.86 0.0934 1.044 0.676
LGXSM19 m 1.2911 0.088 1.4646 1.1177
LGXSM20 f 1.38 0.0934 1.564 1.196
LGXSM20 m 2.1214 0.0998 2.3181 1.9248
LGXSM22 f 0.7092 0.0762 0.8594 0.559
LGXSM22 m 1.6112 0.0934 1.7952 1.4273
LGXSM23 f 0.987 0.0835 1.1516 0.8224
LGXSM23 m 1.3015 0.0732 1.4459 1.1572
LGXSM31 f 1.1233 0.1525 1.4238 0.8229
LGXSM31 m 1.3375 0.132 1.5977 1.0773
LGXSM33 f 1.0412 0.0934 1.2252 0.8573
LGXSM33 m 1.556 0.1181 1.7887 1.3233
LGXSM35 f 1.15 0.0934 1.334 0.966
LGXSM35 m 1.419 0.0835 1.5836 1.2544
LGXSM39 f 1.548 0.0835 1.7126 1.3834
LGXSM39 m 2.38 0.0998 2.5767 2.1833
LGXSM4 f 1.09 0.0934 1.274 0.906
LGXSM4 m 1.295 0.0934 1.479 1.111
LGXSM45 f 1.548 0.1181 1.7807 1.3153
LGXSM45 m 1.72 0.1525 2.0204 1.4196
LGXSM46 f 1.0944 0.088 1.2679 0.921
LGXSM46 m 1.4727 0.0796 1.6296 1.3158
LGXSM48 f 1.146 0.0835 1.3106 0.9814
LGXSM48 m 1.36 0.0934 1.544 1.176
LGXSM5 f 0.98 0.0934 1.164 0.796
LGXSM5 m 1.4517 0.1078 1.6641 1.2392


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
LGXSM10 both 1.3875 0.0683 1.5222 1.2528
LGXSM15 both 1.2241 0.0593 1.341 1.1071
LGXSM18 both 1.2858 0.0642 1.4123 1.1594
LGXSM19 both 1.0756 0.0642 1.202 0.9491
LGXSM20 both 1.7507 0.0683 1.8854 1.6161
LGXSM22 both 1.1602 0.0603 1.279 1.0415
LGXSM23 both 1.1443 0.0555 1.2537 1.0348
LGXSM31 both 1.2304 0.1008 1.4291 1.0317
LGXSM33 both 1.2986 0.0753 1.447 1.1503
LGXSM35 both 1.2845 0.0626 1.4079 1.1611
LGXSM39 both 1.964 0.0651 2.0922 1.8358
LGXSM4 both 1.1925 0.066 1.3226 1.0624
LGXSM45 both 1.634 0.0964 1.824 1.444
LGXSM46 both 1.2836 0.0593 1.4005 1.1666
LGXSM48 both 1.253 0.0626 1.3764 1.1296
LGXSM5 both 1.2158 0.0713 1.3563 1.0753




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA