Phenotype measure:   Richfield1   amb_long_habit

ID, description, units MPD:14516   amb_long_habit   long-term habituation, change in ambulatory activity over days 1-3   [n/d]
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
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Richfield1 - long-term habituation, change in ambulatory activity over days 1-3



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means-325   n/d
Median of the strain means-289   n/d
SD of the strain means± 383
Coefficient of variation (CV)-1.18
Min–max range of strain means-936   –   209   n/d
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 22650472.6638 1617890.9046 2.9427 0.0006
Residuals 144 79171089.2639 549799.231


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m -290.0 331.0   10 105.0 -1.14 -1014.0, 165.0 0.09
A/HeJ m 97.5 501.0   10 158.0 5.14 -876.0, 733.0 1.1
A/J m 44.0 385.0   10 122.0 8.74 -330.0, 1046.0 0.96
AKR/J m -213.0 908.0   10 287.0 -4.26 -1387.0, 1554.0 0.29
B10.D2-Hc0 m -11.3 885.0   10 280.0 -78.3 -1076.0, 1736.0 0.82
BALB/cByJ m 149.0 1270.0   10 402.0 8.51 -2208.0, 2464.0 1.24
BALB/cJ m -289.0 596.0   10 188.0 -2.06 -1704.0, 403.0 0.09
C3H/HeJ m 209.0 438.0   10 139.0 2.1 -326.0, 814.0 1.39
C57BL/6J m -810.0 890.0   20 199.0 -1.1 -2710.0, 1235.0 -1.27
CAST/EiJ m -936.0 941.0   10 298.0 -1.01 -1990.0, 1412.0 -1.6
DBA/2J m -145.0 649.0   10 205.0 -4.48 -1258.0, 914.0 0.47
MRL/MpJ m -705.0 963.0   10 304.0 -1.37 -1741.0, 604.0 -0.99
NZB/BlNJ m -651.0 419.0   10 132.0 -0.643 -1436.0, -36.5 -0.85
NZW/LacJ m -621.0 546.0   10 173.0 -0.879 -1568.0, 16.5 -0.77
SPRET/EiJ m -696.0 393.0   9 131.0 -0.565 -1577.0, -172.0 -0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m -289.5 234.478 173.9633 -752.9633
A/HeJ m 97.55 234.478 561.0133 -365.9133
A/J m 44.0 234.478 507.4633 -419.4633
AKR/J m -213.1 234.478 250.3633 -676.5633
B10.D2-Hc0 m -11.3 234.478 452.1633 -474.7633
BALB/cByJ m 149.25 234.478 612.7133 -314.2133
BALB/cJ m -289.4 234.478 174.0633 -752.8633
C3H/HeJ m 208.75 234.478 672.2133 -254.7133
C57BL/6J m -810.35 165.801 -482.6319 -1138.0681
CAST/EiJ m -936.2 234.478 -472.7367 -1399.6633
DBA/2J m -144.8 234.478 318.6633 -608.2633
MRL/MpJ m -705.0 234.478 -241.5367 -1168.4633
NZB/BlNJ m -651.15 234.478 -187.6867 -1114.6133
NZW/LacJ m -620.95 234.478 -157.4867 -1084.4133
SPRET/EiJ m -695.8889 247.1615 -207.3556 -1184.4221




  GWAS USING LINEAR MIXED MODELS