Phenotype measure:   Richfield1   amb_rate

ID, description, units MPD:14515   amb_rate   rate of ambulatory activity per minute   [n/min]
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
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Richfield1 - rate of ambulatory activity per minute



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means82.3   n/min
Median of the strain means65.9   n/min
SD of the strain means± 49.7
Coefficient of variation (CV)0.604
Min–max range of strain means24.7   –   190   n/min
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 451055.0863 32218.2204 39.0826 < 0.0001
Residuals 144 118708.0286 824.3613


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 24.7 13.1   10 4.15 0.532 7.5, 44.0 -1.16
A/HeJ m 56.6 19.7   10 6.22 0.348 30.1, 88.9 -0.52
A/J m 33.9 15.1   10 4.78 0.445 18.4, 67.0 -0.97
AKR/J m 116.0 31.2   10 9.87 0.269 52.4, 162.0 0.68
B10.D2-Hc0 m 164.0 25.9   10 8.19 0.157 128.0, 205.0 1.64
BALB/cByJ m 110.0 56.8   10 18.0 0.518 58.6, 247.0 0.56
BALB/cJ m 58.2 29.6   10 9.36 0.508 15.3, 101.0 -0.49
C3H/HeJ m 65.9 15.3   10 4.83 0.232 33.2, 80.3 -0.33
C57BL/6J m 190.0 40.2   20 8.99 0.211 125.0, 287.0 2.17
CAST/EiJ m 121.0 20.5   10 6.49 0.169 89.4, 144.0 0.78
DBA/2J m 52.6 16.8   10 5.31 0.319 27.6, 84.0 -0.6
MRL/MpJ m 94.3 38.4   10 12.1 0.407 51.0, 168.0 0.24
NZB/BlNJ m 43.2 17.7   10 5.59 0.409 16.7, 73.4 -0.79
NZW/LacJ m 78.3 17.5   10 5.54 0.224 50.7, 109.0 -0.08
SPRET/EiJ m 26.2 15.4   9 5.14 0.588 13.5, 64.0 -1.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 24.69 9.0794 42.6362 6.7438
A/HeJ m 56.62 9.0794 74.5662 38.6738
A/J m 33.95 9.0794 51.8962 16.0038
AKR/J m 116.25 9.0794 134.1962 98.3038
B10.D2-Hc0 m 164.4 9.0794 182.3462 146.4538
BALB/cByJ m 109.69 9.0794 127.6362 91.7438
BALB/cJ m 58.25 9.0794 76.1962 40.3038
C3H/HeJ m 65.87 9.0794 83.8162 47.9238
C57BL/6J m 190.0 6.4201 202.6899 177.3101
CAST/EiJ m 121.41 9.0794 139.3562 103.4638
DBA/2J m 52.61 9.0794 70.5562 34.6638
MRL/MpJ m 94.32 9.0794 112.2662 76.3738
NZB/BlNJ m 43.25 9.0794 61.1962 25.3038
NZW/LacJ m 78.34 9.0794 96.2862 60.3938
SPRET/EiJ m 26.2222 9.5706 45.1392 7.3053




  GWAS USING LINEAR MIXED MODELS