Project measure / variable:   Richfield1   horiz_long_habit

ID, description, units MPD:14512   horiz_long_habit   long-term habituation, change in horizontal activity over days 1-3   [n/d]  
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Richfield1 - long-term habituation, change in horizontal activity over days 1-3



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means-376   n/d
Median of the strain means-317   n/d
SD of the strain means± 502
Coefficient of variation (CV)-1.33
Min–max range of strain means-1235   –   267   n/d
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 39523656.5461 2823118.3247 2.9887 0.0005
Residuals 144 136019924.2181 944582.8071


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m -317.0 440.0   10 139.0 -1.39 -1047.0, 331.0 0.12
A/HeJ m 108.0 666.0   10 211.0 6.15 -1082.0, 1073.0 0.96
A/J m 42.5 577.0   10 182.0 13.6 -447.0, 1538.0 0.83
AKR/J m -136.0 1094.0   10 346.0 -8.04 -1372.0, 2058.0 0.48
B10.D2-Hc0 m 116.0 1137.0   10 360.0 9.78 -898.0, 2492.0 0.98
BALB/cByJ m 196.0 1642.0   10 519.0 8.38 -2836.0, 3211.0 1.14
BALB/cJ m -352.0 711.0   10 225.0 -2.02 -1829.0, 554.0 0.05
C3H/HeJ m 267.0 643.0   10 203.0 2.4 -464.0, 1290.0 1.28
C57BL/6J m -1069.0 1206.0   20 270.0 -1.13 -3771.0, 1662.0 -1.38
CAST/EiJ m -1235.0 1307.0   10 413.0 -1.06 -2699.0, 1952.0 -1.71
DBA/2J m -60.4 793.0   10 251.0 -13.1 -1208.0, 1360.0 0.63
MRL/MpJ m -837.0 1261.0   10 399.0 -1.51 -2101.0, 777.0 -0.92
NZB/BlNJ m -824.0 649.0   10 205.0 -0.788 -1897.0, 270.0 -0.89
NZW/LacJ m -649.0 666.0   10 211.0 -1.03 -1741.0, 362.0 -0.54
SPRET/EiJ m -890.0 444.0   9 148.0 -0.499 -1829.0, -292.0 -1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m -317.15 307.3407 290.3319 -924.6319
A/HeJ m 108.25 307.3407 715.7319 -499.2319
A/J m 42.55 307.3407 650.0319 -564.9319
AKR/J m -136.0 307.3407 471.4819 -743.4819
B10.D2-Hc0 m 116.3 307.3407 723.7819 -491.1819
BALB/cByJ m 195.9 307.3407 803.3819 -411.5819
BALB/cJ m -351.6 307.3407 255.8819 -959.0819
C3H/HeJ m 267.35 307.3407 874.8319 -340.1319
C57BL/6J m -1068.775 217.3227 -639.2204 -1498.3296
CAST/EiJ m -1235.3 307.3407 -627.8181 -1842.7819
DBA/2J m -60.4 307.3407 547.0819 -667.8819
MRL/MpJ m -837.0 307.3407 -229.5181 -1444.4819
NZB/BlNJ m -823.6 307.3407 -216.1181 -1431.0819
NZW/LacJ m -649.45 307.3407 -41.9681 -1256.9319
SPRET/EiJ m -890.2222 323.9655 -249.8801 -1530.5644




  GWAS USING LINEAR MIXED MODELS