Project measure / variable:   Richfield1   amb3

ID, description, units MPD:14506   amb3   ambulatory activity counts, 45 min test   [n]  day3  
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Richfield1 - ambulatory activity counts, 45 min test day3



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means3414   n
Median of the strain means2916   n
SD of the strain means± 2198
Coefficient of variation (CV)0.644
Min–max range of strain means555   –   7862   n
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 851802913.973 60843065.2838 24.1127 < 0.0001
Residuals 144 363352065.7 2523278.234


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 874.0 600.0   10 190.0 0.686 126.0, 1879.0 -1.16
A/HeJ m 2808.0 844.0   10 267.0 0.301 1705.0, 4161.0 -0.28
A/J m 1530.0 793.0   10 251.0 0.518 470.0, 2816.0 -0.86
AKR/J m 4815.0 1512.0   10 478.0 0.314 1812.0, 6602.0 0.64
B10.D2-Hc0 m 7469.0 1519.0   10 480.0 0.203 4837.0, 8843.0 1.85
BALB/cByJ m 5076.0 3459.0   10 1094.0 0.681 1923.0, 13356.0 0.76
BALB/cJ m 2347.0 1390.0   10 439.0 0.592 838.0, 4536.0 -0.49
C3H/HeJ m 3045.0 997.0   10 315.0 0.327 1279.0, 4448.0 -0.17
C57BL/6J m 7862.0 2249.0   20 503.0 0.286 4120.0, 11805.0 2.02
CAST/EiJ m 4645.0 1281.0   10 405.0 0.276 2825.0, 7436.0 0.56
DBA/2J m 2169.0 854.0   10 270.0 0.394 1114.0, 3571.0 -0.57
MRL/MpJ m 3554.0 2180.0   10 689.0 0.613 985.0, 8053.0 0.06
NZB/BlNJ m 1542.0 757.0   10 239.0 0.491 314.0, 2768.0 -0.85
NZW/LacJ m 2916.0 855.0   10 270.0 0.293 1905.0, 4935.0 -0.23
SPRET/EiJ m 555.0 315.0   9 105.0 0.569 40.0, 1140.0 -1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 873.9 502.3224 1866.778 0.0
A/HeJ m 2807.5 502.3224 3800.378 1814.622
A/J m 1529.5 502.3224 2522.378 536.622
AKR/J m 4815.2 502.3224 5808.078 3822.322
B10.D2-Hc0 m 7469.0 502.3224 8461.878 6476.122
BALB/cByJ m 5076.2 502.3224 6069.078 4083.322
BALB/cJ m 2346.6 502.3224 3339.478 1353.722
C3H/HeJ m 3045.3 502.3224 4038.178 2052.422
C57BL/6J m 7862.3 355.1956 8564.3708 7160.2292
CAST/EiJ m 4644.7 502.3224 5637.578 3651.822
DBA/2J m 2168.7 502.3224 3161.578 1175.822
MRL/MpJ m 3554.1 502.3224 4546.978 2561.222
NZB/BlNJ m 1541.6 502.3224 2534.478 548.722
NZW/LacJ m 2916.4 502.3224 3909.278 1923.522
SPRET/EiJ m 554.6667 529.4943 1601.252 0.0




  GWAS USING LINEAR MIXED MODELS