Project measure / variable:   Richfield1   horiz2

ID, description, units MPD:14502   horiz2   number of horizontal beam breaks, 45 min test   [n]  day2  
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Richfield1 - number of horizontal beam breaks, 45 min test day2



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means5529   n
Median of the strain means4955   n
SD of the strain means± 3131
Coefficient of variation (CV)0.566
Min–max range of strain means1731   –   11783   n
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 1721963145.6772 122997367.5484 34.2742 < 0.0001
Residuals 144 516762878.2222 3588631.0988


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1731.0 993.0   10 314.0 0.574 120.0, 2968.0 -1.21
A/HeJ m 3825.0 1467.0   10 464.0 0.383 1907.0, 5998.0 -0.54
A/J m 2913.0 1214.0   10 384.0 0.417 1550.0, 5650.0 -0.84
AKR/J m 7956.0 2532.0   10 801.0 0.318 2714.0, 11110.0 0.78
B10.D2-Hc0 m 11060.0 1511.0   10 478.0 0.137 9033.0, 12685.0 1.77
BALB/cByJ m 7180.0 3329.0   10 1053.0 0.464 3141.0, 15120.0 0.53
BALB/cJ m 4015.0 1874.0   10 593.0 0.467 372.0, 6580.0 -0.48
C3H/HeJ m 5028.0 1448.0   10 458.0 0.288 2613.0, 6866.0 -0.16
C57BL/6J m 11783.0 1980.0   20 443.0 0.168 7722.0, 15158.0 2.0
CAST/EiJ m 7737.0 1817.0   10 575.0 0.235 4319.0, 10618.0 0.71
DBA/2J m 3987.0 1549.0   10 490.0 0.388 1478.0, 6390.0 -0.49
MRL/MpJ m 6546.0 3201.0   10 1012.0 0.489 2579.0, 11065.0 0.32
NZB/BlNJ m 2457.0 1125.0   10 356.0 0.458 679.0, 4275.0 -0.98
NZW/LacJ m 4955.0 1064.0   10 336.0 0.215 3446.0, 7100.0 -0.18
SPRET/EiJ m 1762.0 950.0   9 317.0 0.539 945.0, 3794.0 -1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 1730.7 599.0518 2914.7709 546.6291
A/HeJ m 3825.4 599.0518 5009.4709 2641.3291
A/J m 2913.2 599.0518 4097.2709 1729.1291
AKR/J m 7955.6 599.0518 9139.6709 6771.5291
B10.D2-Hc0 m 11059.8 599.0518 12243.8709 9875.7291
BALB/cByJ m 7179.9 599.0518 8363.9709 5995.8291
BALB/cJ m 4015.0 599.0518 5199.0709 2830.9291
C3H/HeJ m 5027.6 599.0518 6211.6709 3843.5291
C57BL/6J m 11782.8 423.5936 12620.0646 10945.5354
CAST/EiJ m 7736.9 599.0518 8920.9709 6552.8291
DBA/2J m 3987.1 599.0518 5171.1709 2803.0291
MRL/MpJ m 6545.8 599.0518 7729.8709 5361.7291
NZB/BlNJ m 2456.8 599.0518 3640.8709 1272.7291
NZW/LacJ m 4955.4 599.0518 6139.4709 3771.3291
SPRET/EiJ m 1762.4444 631.4561 3010.5648 514.3241




  GWAS USING LINEAR MIXED MODELS