Project measure / variable:   Richfield1   horiz1

ID, description, units MPD:14501   horiz1   number of horizontal beam breaks, 45 min test   [n]  day1  
Data set, strains Richfield1   inbred   15 strains     sex: m     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Richfield1 - number of horizontal beam breaks, 45 min test day1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means6014   n
Median of the strain means4577   n
SD of the strain means± 3223
Coefficient of variation (CV)0.536
Min–max range of strain means2229   –   13213   n
Mean sample size per strain10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 1927544842.6017 137681774.4715 52.7739 < 0.0001
Residuals 144 375681279.2222 2608897.7724


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 2229.0 1100.0   10 348.0 0.494 926.0, 4092.0 -1.17
A/HeJ m 4315.0 1581.0   10 500.0 0.366 2364.0, 7117.0 -0.53
A/J m 2658.0 993.0   10 314.0 0.374 803.0, 4513.0 -1.04
AKR/J m 7314.0 1688.0   10 534.0 0.231 4636.0, 9570.0 0.4
B10.D2-Hc0 m 11233.0 1842.0   10 583.0 0.164 7929.0, 14573.0 1.62
BALB/cByJ m 6982.0 2413.0   10 763.0 0.346 3984.0, 11097.0 0.3
BALB/cJ m 4577.0 1968.0   10 622.0 0.43 1298.0, 7829.0 -0.45
C3H/HeJ m 4307.0 825.0   10 261.0 0.191 2419.0, 5202.0 -0.53
C57BL/6J m 13213.0 2032.0   20 454.0 0.154 9059.0, 17602.0 2.23
CAST/EiJ m 9284.0 1785.0   10 565.0 0.192 6987.0, 12389.0 1.01
DBA/2J m 3953.0 1196.0   10 378.0 0.303 2472.0, 6152.0 -0.64
MRL/MpJ m 7417.0 1844.0   10 583.0 0.249 3779.0, 9811.0 0.44
NZB/BlNJ m 4116.0 1276.0   10 404.0 0.31 2493.0, 6989.0 -0.59
NZW/LacJ m 5719.0 1025.0   10 324.0 0.179 4359.0, 7535.0 -0.09
SPRET/EiJ m 2899.0 1062.0   9 354.0 0.367 1742.0, 5234.0 -0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 2228.7 510.7737 3238.2826 1219.1174
A/HeJ m 4315.3 510.7737 5324.8826 3305.7174
A/J m 2658.3 510.7737 3667.8826 1648.7174
AKR/J m 7313.6 510.7737 8323.1826 6304.0174
B10.D2-Hc0 m 11233.2 510.7737 12242.7826 10223.6174
BALB/cByJ m 6981.9 510.7737 7991.4826 5972.3174
BALB/cJ m 4576.7 510.7737 5586.2826 3567.1174
C3H/HeJ m 4307.1 510.7737 5316.6826 3297.5174
C57BL/6J m 13212.9 361.1716 13926.7827 12499.0173
CAST/EiJ m 9284.1 510.7737 10293.6826 8274.5174
DBA/2J m 3952.6 510.7737 4962.1826 2943.0174
MRL/MpJ m 7416.8 510.7737 8426.3826 6407.2174
NZB/BlNJ m 4115.5 510.7737 5125.0826 3105.9174
NZW/LacJ m 5718.8 510.7737 6728.3826 4709.2174
SPRET/EiJ m 2898.5556 538.4028 3962.749 1834.3621




  GWAS USING LINEAR MIXED MODELS