Project measure / variable:   Auwerx2   rer_night_CD

ID, description, units MPD:114579   rer_night_CD   respiratory exchange rate (VCO2:VO2), 24h test, night time average   [ratio]  CD  
Data set, strains Auwerx2   inbred w/CC8   9 strains     sex: both     age: 14wks
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  STRAIN COMPARISON PLOT
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Auwerx2 - respiratory exchange rate (VCO2:VO2), 24h test, night time average CD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.86979   ratio 0.85363   ratio
Median of the strain means0.8779   ratio 0.85792   ratio
SD of the strain means± 0.04765 ± 0.04849
Coefficient of variation (CV)0.0548 0.0568
Min–max range of strain means0.78639   –   0.93678   ratio 0.76755   –   0.92068   ratio
Mean sample size per strain4.3   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0021 0.0021 1.2935 0.2599
strain 7 0.1208 0.0173 10.7011 < 0.0001
sex:strain 7 0.032 0.0046 2.8311 0.0128
Residuals 60 0.0967 0.0016


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.8779 0.02406   5 0.01076 0.0274 0.84615, 0.91125 0.17
129S1/SvImJ m 0.88331 0.02981   5 0.01333 0.0337 0.84967, 0.91575 0.61
A/J f 0.82026 0.0879   4 0.04395 0.1072 0.72419, 0.89698 -1.04
A/J m 0.85792 0.07028   3 0.04058 0.0819 0.78053, 0.91778 0.09
C57BL/6J f 0.88957 0.02542   5 0.01137 0.0286 0.8608, 0.91689 0.42
C57BL/6J m 0.88657 0.05436   5 0.02431 0.0613 0.79746, 0.94075 0.68
CAST/EiJ f 0.92124 0.0   1   0.0 0.0 0.92124, 0.92124 1.08
CAST/EiJ m 0.85244 0.09695   3 0.05597 0.1137 0.74631, 0.93635 -0.02
DBA/2J f 0.84285 0.04389   5 0.01963 0.0521 0.80069, 0.90345 -0.57
DBA/2J m 0.82594 0.02944   5 0.01317 0.0356 0.79556, 0.86075 -0.57
NOD/ShiLtJ f 0.88972 0.0446   7 0.01686 0.0501 0.81558, 0.94474 0.42
NOD/ShiLtJ m 0.92068 0.01036   5 0.00463122 0.0112 0.90808, 0.93629 1.38
NZO/HlLtJ f 0.78639 0.02257   4 0.01128 0.0287 0.75988, 0.815 -1.75
NZO/HlLtJ m 0.79958 0.03354   5 0.015 0.042 0.759, 0.83865 -1.11
PWK/PhJ f 0.86338 0.04112   5 0.01839 0.0476 0.7958, 0.90163 -0.13
PWK/PhJ m 0.76755 0.0197   5 0.0088098 0.0257 0.75061, 0.79497 -1.78
WSB/EiJ f 0.93678 0.03323   3 0.01919 0.0355 0.91539, 0.97507 1.41
WSB/EiJ m 0.88868 0.02883   5 0.01289 0.0324 0.83969, 0.91221 0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.8779 0.0179578278 0.9138210038 0.8419789962
129S1/SvImJ m 0.883314 0.0179578278 0.9192350038 0.8473929962
A/J f 0.82026 0.0200774618 0.8604209031 0.7800990969
A/J m 0.8579166667 0.023183456 0.9042904831 0.8115428502
C57BL/6J f 0.889568 0.0179578278 0.9254890038 0.8536469962
C57BL/6J m 0.886566 0.0179578278 0.9224870038 0.8506449962
DBA/2J f 0.842848 0.0179578278 0.8787690038 0.8069269962
DBA/2J m 0.825936 0.0179578278 0.8618570038 0.7900149962
NOD/ShiLtJ f 0.8897157143 0.0151771345 0.9200745035 0.8593569251
NOD/ShiLtJ m 0.92068 0.0179578278 0.9566010038 0.8847589962
NZO/HlLtJ f 0.786385 0.0200774618 0.8265459031 0.7462240969
NZO/HlLtJ m 0.799578 0.0179578278 0.8354990038 0.7636569962
PWK/PhJ f 0.863378 0.0179578278 0.8992990038 0.8274569962
PWK/PhJ m 0.767554 0.0179578278 0.8034750038 0.7316329962
WSB/EiJ f 0.9367833333 0.023183456 0.9831571498 0.8904095169
WSB/EiJ m 0.888678 0.0179578278 0.9245990038 0.8527569962


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.880607 0.0126981018 0.9060069854 0.8552070146
A/J both 0.8390883333 0.0153344148 0.8697617298 0.8084149369
C57BL/6J both 0.888067 0.0126981018 0.9134669854 0.8626670146
DBA/2J both 0.834392 0.0126981018 0.8597919854 0.8089920146
NOD/ShiLtJ both 0.9051978571 0.0117561579 0.9287136741 0.8816820402
NZO/HlLtJ both 0.7929815 0.0134683708 0.8199222528 0.7660407472
PWK/PhJ both 0.815466 0.0126981018 0.8408659854 0.7900660146
WSB/EiJ both 0.9127306667 0.014662505 0.9420600434 0.8834012899




  GWAS USING LINEAR MIXED MODELS