Project measure / variable:   Auwerx2   bw_19wks_HFD

ID, description, units MPD:114554   bw_19wks_HFD   body weight at 19 wks of age   [g]  HFD  
Data set, strains Auwerx2   inbred w/CC8   9 strains     sex: both     age: 19wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx2 - body weight at 19 wks of age HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means31.007   g 36.451   g
Median of the strain means25.725   g 34.128   g
SD of the strain means± 19.463 ± 17.294
Coefficient of variation (CV)0.6277 0.4745
Min–max range of strain means13.653   –   78.54   g 17.488   –   75.45   g
Mean sample size per strain4.4   mice 3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 639.4416 639.4416 89.9003 < 0.0001
strain 7 4579.2537 654.1791 91.9723 < 0.0001
sex:strain 7 370.4702 52.9243 7.4407 < 0.0001
Residuals 52 369.8648 7.1128


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 23.76 0.82362   5 0.36833 0.0347 22.55, 24.8 -0.37
129S1/SvImJ m 34.88 0.89095   2   0.63 0.0255 34.25, 35.51 -0.09
A/J f 23.54 2.3261   4 1.1631 0.0988 22.15, 27.02 -0.38
A/J m 28.882 1.6126   5 0.72119 0.0558 26.73, 30.71 -0.44
C57BL/6J f 28.56 3.345   3 1.9312 0.1171 26.51, 32.42 -0.13
C57BL/6J m 45.913 3.5464   4 1.7732 0.0772 40.71, 48.18 0.55
CAST/EiJ f 14.232 1.1028   5 0.49317 0.0775 13.13, 15.86 -0.86
CAST/EiJ m 19.6 2.4042   2   1.7 0.1227 17.9, 21.3 -0.97
DBA/2J f 37.176 4.5862   5 2.051 0.1234 31.15, 41.88 0.32
DBA/2J m 41.894 3.2235   5 1.4416 0.0769 38.65, 47.21 0.31
NOD/ShiLtJ f 33.875 3.2681   6 1.3342 0.0965 31.16, 39.31 0.15
NOD/ShiLtJ m 34.128 1.0957   5 0.49 0.0321 32.87, 35.47 -0.13
NZO/HlLtJ f 78.54 2.0032   5 0.89588 0.0255 76.76, 80.9 2.44
NZO/HlLtJ m 75.45 0.0   1   0.0 0.0 75.45, 75.45 2.26
PWK/PhJ f 25.725 2.331   4 1.1655 0.0906 22.91, 28.15 -0.27
PWK/PhJ m 29.822 3.8723   5 1.7318 0.1298 25.45, 34.24 -0.38
WSB/EiJ f 13.653 0.62613   3 0.36149 0.0459 13.05, 14.3 -0.89
WSB/EiJ m 17.488 1.4144   5 0.63253 0.0809 16.3, 19.7 -1.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 23.76 1.1927099584 26.1533476274 21.3666523726
129S1/SvImJ m 34.88 1.8858400283 38.6642148676 31.0957851324
A/J f 23.54 1.3334902722 26.2158439943 20.8641560057
A/J m 28.882 1.1927099584 31.2753476274 26.4886523726
C57BL/6J f 28.56 1.5397819352 31.6497985009 25.4702014991
C57BL/6J m 45.9125 1.3334902722 48.5883439943 43.2366560057
CAST/EiJ f 14.232 1.1927099584 16.6253476274 11.8386523726
CAST/EiJ m 19.6 1.8858400283 23.3842148676 15.8157851324
DBA/2J f 37.176 1.1927099584 39.5693476274 34.7826523726
DBA/2J m 41.894 1.1927099584 44.2873476274 39.5006523726
NOD/ShiLtJ f 33.875 1.088790248 36.0598174725 31.6901825275
NOD/ShiLtJ m 34.128 1.1927099584 36.5213476274 31.7346523726
PWK/PhJ f 25.725 1.3334902722 28.4008439943 23.0491560057
PWK/PhJ m 29.822 1.1927099584 32.2153476274 27.4286523726
WSB/EiJ f 13.6533333333 1.5397819352 16.7431318342 10.5635348325
WSB/EiJ m 17.488 1.1927099584 19.8813476274 15.0946523726


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 29.32 1.1156780065 31.5587717073 27.0812282927
A/J both 26.211 0.8945324688 28.0060107205 24.4159892795
C57BL/6J both 37.23625 1.0184700185 39.2799596086 35.1925403914
CAST/EiJ both 16.916 1.1156780065 19.1547717073 14.6772282927
DBA/2J both 39.535 0.8433732996 41.2273523371 37.8426476629
NOD/ShiLtJ both 34.0015 0.807468459 35.6218040034 32.3811959966
PWK/PhJ both 27.7735 0.8945324688 29.5685107205 25.9784892795
WSB/EiJ both 15.5706666667 0.9738436031 17.5248268214 13.6165065119




  GWAS USING LINEAR MIXED MODELS