Project measure / variable:   Auwerx2   bw_9wks_HFD

ID, description, units MPD:114534   bw_9wks_HFD   body weight at 9 wks of age   [g]  HFD  
Data set, strains Auwerx2   inbred w/CC8   9 strains     sex: both     age: 9wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx2 - body weight at 9 wks of age HFD



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means21.659   g 26.84   g
Median of the strain means19.795   g 27.277   g
SD of the strain means± 9.3963 ± 11.598
Coefficient of variation (CV)0.4338 0.4321
Min–max range of strain means12.198   –   43.814   g 13.93   –   53.35   g
Mean sample size per strain4.4   mice 3.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 307.0144 307.0144 98.5198 < 0.0001
strain 7 1755.5771 250.7967 80.4797 < 0.0001
sex:strain 7 85.9069 12.2724 3.9382 0.0016
Residuals 52 162.0461 3.1163


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 21.08 1.7657   5 0.78966 0.0838 18.94, 22.87 -0.06
129S1/SvImJ m 28.885 1.5344   2   1.085 0.0531 27.8, 29.97 0.18
A/J f 19.795 1.1749   4 0.58745 0.0594 18.47, 21.33 -0.2
A/J m 23.784 1.2961   5 0.57962 0.0545 21.87, 24.97 -0.26
C57BL/6J f 19.253 0.54519   3 0.31477 0.0283 18.67, 19.75 -0.26
C57BL/6J m 27.277 1.5552   4 0.77758 0.057 25.45, 29.25 0.04
CAST/EiJ f 12.198 0.88378   5 0.39524 0.0725 11.4, 13.65 -1.01
CAST/EiJ m 15.37 0.35355   2   0.25 0.023 15.12, 15.62 -0.99
DBA/2J f 24.126 1.2624   5 0.56454 0.0523 23.07, 26.19 0.26
DBA/2J m 31.024 3.2272   5 1.4433 0.104 26.95, 35.23 0.36
NOD/ShiLtJ f 24.788 2.7227   6 1.1116 0.1098 21.11, 29.37 0.33
NOD/ShiLtJ m 27.666 1.2518   5 0.5598 0.0452 26.35, 29.48 0.07
NZO/HlLtJ f 43.814 3.4811   5 1.5568 0.0795 39.77, 48.7 2.36
NZO/HlLtJ m 53.35 0.0   1   0.0 0.0 53.35, 53.35 2.29
PWK/PhJ f 17.195 2.1208   4 1.0604 0.1233 14.83, 19.89 -0.48
PWK/PhJ m 20.27 2.0032   5 0.89584 0.0988 17.32, 22.81 -0.57
WSB/EiJ f 12.683 1.1068   3 0.63899 0.0873 11.45, 13.59 -0.96
WSB/EiJ m 13.93 0.68895   5 0.30811 0.0495 13.26, 14.87 -1.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 21.08 0.7894645256 22.664176468 19.495823532
129S1/SvImJ m 28.885 1.2482530164 31.3898029273 26.3801970727
A/J f 19.795 0.8826481725 21.5661631354 18.0238368646
A/J m 23.784 0.7894645256 25.368176468 22.199823532
C57BL/6J f 19.2533333333 1.01919432 21.2984963593 17.2081703073
C57BL/6J m 27.2775 0.8826481725 29.0486631354 25.5063368646
CAST/EiJ f 12.198 0.7894645256 13.782176468 10.613823532
CAST/EiJ m 15.37 1.2482530164 17.8748029273 12.8651970727
DBA/2J f 24.126 0.7894645256 25.710176468 22.541823532
DBA/2J m 31.024 0.7894645256 32.608176468 29.439823532
NOD/ShiLtJ f 24.7883333333 0.720679215 26.2344819777 23.342184689
NOD/ShiLtJ m 27.666 0.7894645256 29.250176468 26.081823532
PWK/PhJ f 17.195 0.8826481725 18.9661631354 15.4238368646
PWK/PhJ m 20.27 0.7894645256 21.854176468 18.685823532
WSB/EiJ f 12.6833333333 1.01919432 14.7284963593 10.6381703073
WSB/EiJ m 13.93 0.7894645256 15.514176468 12.345823532


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 24.9825 0.7384764435 26.4643613959 23.5006386041
A/J both 21.7895 0.5920983942 22.977632351 20.601367649
C57BL/6J both 23.2654166667 0.6741336771 24.618164856 21.9126684773
CAST/EiJ both 13.784 0.7384764435 15.2658613959 12.3021386041
DBA/2J both 27.575 0.5582357196 28.6951819231 26.4548180769
NOD/ShiLtJ both 26.2271666667 0.5344700104 27.2996592055 25.1546741279
PWK/PhJ both 18.7325 0.5920983942 19.920632351 17.544367649
WSB/EiJ both 13.3066666667 0.6445950859 14.6001413364 12.013191997




  GWAS USING LINEAR MIXED MODELS