Project measure / variable:   Graham3   ics_CD3_pos_CD8_pos

ID, description, units MPD:113839   ics_CD3_pos_CD8_pos   percentage of splenic CD3+ T cells that are CD8+ following stimulation with anti-CD3 and anti-CD28   [%]  
Data set, strains Graham3   CC RIX   102 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham3 - percentage of splenic CD3+ T cells that are CD8+ following stimulation with anti-CD3 and anti-CD28



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested102 strains
Mean of the strain means34.556   %
Median of the strain means33.317   %
SD of the strain means± 9.3751
Coefficient of variation (CV)0.2713
Min–max range of strain means12.7   –   66.02   %
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 101 40715.0924 403.1197 8.4612 < 0.0001
Residuals 358 17056.2939 47.6433


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 055) m 40.15 3.5596   6 1.4532 0.0887 35.5, 44.7 0.6
RIX:CC(001 x 074) m 36.733 6.6124   3 3.8176 0.18 29.9, 43.1 0.23
RIX:CC(002 x 011) m 19.92 8.468   5 3.787 0.4251 9.5, 27.8 -1.56
RIX:CC(002 x 021) m 35.1 6.46   6 2.6373 0.184 26.9, 41.8 0.06
RIX:CC(003 x 051) m 33.883 9.8872   6 4.0365 0.2918 20.5, 44.4 -0.07
RIX:CC(003 x 062) m 27.533 4.9009   6 2.0008 0.178 20.7, 35.7 -0.75
RIX:CC(004 x 011) m 37.7 9.0549   6 3.6967 0.2402 28.8, 49.4 0.34
RIX:CC(004 x 012) m 42.633 4.0692   6 1.6613 0.0954 36.5, 48.3 0.86
RIX:CC(005 x 001) m 45.533 2.7616   6 1.1274 0.0607 42.4, 49.4 1.17
RIX:CC(005 x 038) m 23.267 4.5004   3 2.5983 0.1934 20.0, 28.4 -1.2
RIX:CC(005 x 040) m 34.233 6.7161   6 2.7419 0.1962 24.6, 41.3 -0.03
RIX:CC(006 x 007) m 38.367 7.6935   6 3.1409 0.2005 28.8, 49.4 0.41
RIX:CC(006 x 039) m 36.867 3.807   3 2.198 0.1033 33.2, 40.8 0.25
RIX:CC(007 x 070) m 34.833 6.73   3 3.8856 0.1932 29.9, 42.5 0.03
RIX:CC(008 x 009) m 38.067 0.45092   3 0.26034 0.0118 37.6, 38.5 0.37
RIX:CC(008 x 010) m 47.233 5.5103   3 3.1814 0.1167 41.2, 52.0 1.35
RIX:CC(008 x 018) m 30.9 3.851   3 2.2234 0.1246 27.0, 34.7 -0.39
RIX:CC(009 x 040) m 22.067 8.1249   6 3.317 0.3682 13.0, 35.0 -1.33
RIX:CC(010 x 015) m 32.4 1.0918   6 0.44572 0.0337 30.9, 33.5 -0.23
RIX:CC(010 x 060) m 36.833 3.5838   3 2.0691 0.0973 33.0, 40.1 0.24
RIX:CC(011 x 032) m 21.8 1.5133   3 0.87369 0.0694 20.6, 23.5 -1.36
RIX:CC(011 x 042) m 27.433 4.1625   6 1.6993 0.1517 23.5, 35.1 -0.76
RIX:CC(012 x 032) m 23.533 8.6703   6 3.5396 0.3684 15.3, 34.5 -1.18
RIX:CC(012 x 038) m 30.967 2.0502   3 1.1837 0.0662 28.9, 33.0 -0.38
RIX:CC(013 x 041) m 36.589 3.0998   9 1.0333 0.0847 29.9, 41.0 0.22
RIX:CC(014 x 059) m 53.97 4.2828   6 1.7485 0.0794 48.5, 59.1 2.07
RIX:CC(015 x 018) m 30.365 24.392   6 9.9581 0.8033 1.67, 53.9 -0.45
RIX:CC(015 x 059) m 33.433 2.2189   3 1.2811 0.0664 31.4, 35.8 -0.12
RIX:CC(016 x 038) m 32.733 11.722   6 4.7853 0.3581 21.6, 44.7 -0.19
RIX:CC(017 x 004) m 30.05 2.8452   6 1.1615 0.0947 26.4, 34.2 -0.48
RIX:CC(017 x 041) m 32.917 3.6788   6 1.5019 0.1118 27.9, 38.7 -0.17
RIX:CC(018 x 009) m 37.7 4.8125   3 2.7785 0.1277 32.7, 42.3 0.34
RIX:CC(018 x 065) m 43.4 6.1579   3 3.5553 0.1419 38.2, 50.2 0.94
RIX:CC(019 x 002) m 28.009 3.0963   11 0.93356 0.1105 22.6, 33.7 -0.7
RIX:CC(019 x 004) m 34.633 6.3279   6 2.5834 0.1827 28.8, 46.6 0.01
RIX:CC(019 x 027) m 32.667 1.9858   3 1.1465 0.0608 31.1, 34.9 -0.2
RIX:CC(021 x 023) m 41.733 1.2662   3 0.73106 0.0303 40.3, 42.7 0.77
RIX:CC(022 x 024) m 41.6 2.1378   3 1.2342 0.0514 39.2, 43.3 0.75
RIX:CC(022 x 044) m 29.733 4.8014   3 2.7721 0.1615 25.0, 34.6 -0.51
RIX:CC(023 x 025) m 31.017 10.814   6 4.4147 0.3486 24.1, 52.2 -0.38
RIX:CC(024 x 023) m 32.083 9.9973   6 4.0814 0.3116 22.3, 42.9 -0.26
RIX:CC(024 x 052) m 45.933 3.453   3 1.9936 0.0752 42.4, 49.3 1.21
RIX:CC(025 x 028) m 49.55 4.0342   6 1.647 0.0814 44.3, 56.2 1.6
RIX:CC(026 x 034) m 38.617 2.5262   6 1.0313 0.0654 35.5, 41.8 0.43
RIX:CC(027 x 036) m 20.733 4.7438   3 2.7388 0.2288 17.7, 26.2 -1.47
RIX:CC(027 x 045) m 34.3 5.7263   3 3.3061 0.1669 30.0, 40.8 -0.03
RIX:CC(029 x 027) m 33.35 9.4014   6 3.8381 0.2819 17.8, 43.6 -0.13
RIX:CC(029 x 071) m 46.3 5.9733   3 3.4487 0.129 41.9, 53.1 1.25
RIX:CC(030 x 023) m 25.567 5.6448   3 3.259 0.2208 20.8, 31.8 -0.96
RIX:CC(030 x 061) m 41.0 14.523   6 5.9291 0.3542 25.9, 55.8 0.69
RIX:CC(032 x 013) m 27.75 3.1942   6 1.304 0.1151 24.2, 31.8 -0.73
RIX:CC(032 x 017) m 21.317 2.7888   6 1.1385 0.1308 17.3, 25.5 -1.41
RIX:CC(033 x 046) m 21.875 13.635   6 5.5666 0.6233 4.55, 40.2 -1.35
RIX:CC(035 x 020) m 28.4 2.8513   3 1.6462 0.1004 25.6, 31.3 -0.66
RIX:CC(035 x 071) m 50.97 3.782   3 2.1835 0.0742 47.5, 55.0 1.75
RIX:CC(036 x 051) m 52.73 4.8387   3 2.7936 0.0918 49.0, 58.2 1.94
RIX:CC(037 x 046) m 21.4 1.1136   3 0.64291 0.052 20.4, 22.6 -1.4
RIX:CC(037 x 057) m 27.833 2.3398   6 0.95522 0.0841 25.0, 31.3 -0.72
RIX:CC(038 x 013) m 42.05 1.3838   6 0.56495 0.0329 40.4, 44.3 0.8
RIX:CC(039 x 020) m 57.03 0.66583   3 0.38442 0.0117 56.3, 57.6 2.4
RIX:CC(040 x 003) m 22.967 3.6887   6 1.5059 0.1606 18.5, 29.1 -1.24
RIX:CC(040 x 015) m 29.133 2.318   3 1.3383 0.0796 27.0, 31.6 -0.58
RIX:CC(041 x 012) m 50.12 5.9978   6 2.4486 0.1197 41.4, 59.1 1.66
RIX:CC(041 x 016) m 51.22 5.5901   6 2.2822 0.1091 46.0, 60.6 1.78
RIX:CC(042 x 017) m 16.967 3.0353   3 1.7525 0.1789 13.7, 19.7 -1.88
RIX:CC(042 x 019) m 13.437 10.167   6 4.1506 0.7567 3.9, 26.4 -2.25
RIX:CC(043 x 033) m 29.6 5.3861   3 3.1097 0.182 23.5, 33.7 -0.53
RIX:CC(043 x 037) m 28.517 1.5105   6 0.61667 0.053 27.1, 30.9 -0.64
RIX:CC(044 x 060) m 31.967 1.9553   3 1.1289 0.0612 30.1, 34.0 -0.28
RIX:CC(045 x 044) m 49.583 7.5409   6 3.0786 0.1521 41.7, 57.5 1.6
RIX:CC(046 x 068) m 24.717 4.293   6 1.7526 0.1737 21.7, 33.0 -1.05
RIX:CC(049 x 036) m 37.233 0.37859   3 0.21858 0.0102 36.8, 37.5 0.29
RIX:CC(051 x 005) m 41.729 6.6708   7 2.5213 0.1599 36.5, 55.7 0.77
RIX:CC(051 x 009) m 41.15 14.727   6 6.0121 0.3579 21.8, 58.8 0.7
RIX:CC(052 x 007) m 38.467 0.11547   3 0.06667 0.003 38.4, 38.6 0.42
RIX:CC(052 x 014) m 37.66 3.3931   5 1.5174 0.0901 33.8, 43.1 0.33
RIX:CC(055 x 006) m 30.767 1.5503   3 0.89505 0.0504 29.2, 32.3 -0.4
RIX:CC(055 x 028) m 12.7 1.51   3 0.87178 0.1189 11.3, 14.3 -2.33
RIX:CC(056 x 033) m 41.4 4.4136   3 2.5482 0.1066 36.8, 45.6 0.73
RIX:CC(057 x 052) m 36.417 4.0907   6 1.67 0.1123 30.4, 40.9 0.2
RIX:CC(058 x 022) m 29.167 3.139   3 1.8123 0.1076 26.7, 32.7 -0.57
RIX:CC(059 x 065) m 35.217 2.5709   6 1.0496 0.073 31.6, 37.8 0.07
RIX:CC(060 x 006) m 37.633 2.7046   6 1.1041 0.0719 32.6, 40.4 0.33
RIX:CC(060 x 037) m 27.167 0.73711   3 0.42557 0.0271 26.6, 28.0 -0.79
RIX:CC(061 x 025) m 40.8 2.3643   3 1.365 0.0579 38.1, 42.5 0.67
RIX:CC(061 x 026) m 30.567 6.2787   6 2.5633 0.2054 23.6, 37.8 -0.43
RIX:CC(061 x 039) m 66.02 3.0209   6 1.2333 0.0458 62.7, 69.8 3.36
RIX:CC(062 x 046) m 32.8 1.2124   3 0.7 0.037 31.7, 34.1 -0.19
RIX:CC(062 x 072) m 38.6 4.7948   3 2.7683 0.1242 33.1, 41.9 0.43
RIX:CC(063 x 001) m 48.133 3.2347   3 1.8676 0.0672 44.5, 50.7 1.45
RIX:CC(063 x 002) m 28.167 1.2662   3 0.73106 0.045 26.8, 29.3 -0.68
RIX:CC(065 x 010) m 33.283 16.697   6 6.8166 0.5017 -0.14
RIX:CC(065 x 072) m 29.467 6.1011   3 3.5225 0.2071 23.3, 35.5 -0.54
RIX:CC(068 x 035) m 31.533 4.609   3 2.661 0.1462 27.1, 36.3 -0.32
RIX:CC(068 x 043) m 28.633 5.619   3 3.2441 0.1962 23.3, 34.5 -0.63
RIX:CC(070 x 003) m 25.733 0.77675   3 0.44845 0.0302 25.1, 26.6 -0.94
RIX:CC(072 x 063) m 40.933 6.0797   3 3.5101 0.1485 36.7, 47.9 0.68
RIX:CC(072 x 075) m 31.3 4.0037   3 2.3116 0.1279 26.7, 34.0 -0.35
RIX:CC(074 x 058) m 28.533 3.5162   3 2.0301 0.1232 25.8, 32.5 -0.64
RIX:CC(074 x 062) m 31.433 3.5388   3 2.0431 0.1126 28.6, 35.4 -0.33
RIX:CC(075 x 021) m 43.3 0.6245   3 0.36056 0.0144 42.6, 43.8 0.93
RIX:CC(075 x 035) m 33.233 3.8553   3 2.2259 0.116 30.3, 37.6 -0.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 055) m 40.15 2.8178975332 45.6917125657 34.6082874343
RIX:CC(001 x 074) m 36.7333333333 3.9851089089 44.5704984025 28.8961682642
RIX:CC(002 x 011) m 19.92 3.0868520874 25.9906419589 13.8493580411
RIX:CC(002 x 021) m 35.1 2.8178975332 40.6417125657 29.5582874343
RIX:CC(003 x 051) m 33.8833333333 2.8178975332 39.425045899 28.3416207676
RIX:CC(003 x 062) m 27.5333333333 2.8178975332 33.075045899 21.9916207676
RIX:CC(004 x 011) m 37.7 2.8178975332 43.2417125657 32.1582874343
RIX:CC(004 x 012) m 42.6333333333 2.8178975332 48.175045899 37.0916207676
RIX:CC(005 x 001) m 45.5333333333 2.8178975332 51.075045899 39.9916207676
RIX:CC(005 x 038) m 23.2666666667 3.9851089089 31.1038317358 15.4295015975
RIX:CC(005 x 040) m 34.2333333333 2.8178975332 39.775045899 28.6916207676
RIX:CC(006 x 007) m 38.3666666667 2.8178975332 43.9083792324 32.824954101
RIX:CC(006 x 039) m 36.8666666667 3.9851089089 44.7038317358 29.0295015975
RIX:CC(007 x 070) m 34.8333333333 3.9851089089 42.6704984025 26.9961682642
RIX:CC(008 x 009) m 38.0666666667 3.9851089089 45.9038317358 30.2295015975
RIX:CC(008 x 010) m 47.2333333333 3.9851089089 55.0704984025 39.3961682642
RIX:CC(008 x 018) m 30.9 3.9851089089 38.7371650692 23.0628349308
RIX:CC(009 x 040) m 22.0666666667 2.8178975332 27.6083792324 16.524954101
RIX:CC(010 x 015) m 32.4 2.8178975332 37.9417125657 26.8582874343
RIX:CC(010 x 060) m 36.8333333333 3.9851089089 44.6704984025 28.9961682642
RIX:CC(011 x 032) m 21.8 3.9851089089 29.6371650692 13.9628349308
RIX:CC(011 x 042) m 27.4333333333 2.8178975332 32.975045899 21.8916207676
RIX:CC(012 x 032) m 23.5333333333 2.8178975332 29.075045899 17.9916207676
RIX:CC(012 x 038) m 30.9666666667 3.9851089089 38.8038317358 23.1295015975
RIX:CC(013 x 041) m 36.5888888889 2.3008037013 41.1136782513 32.0640995265
RIX:CC(014 x 059) m 53.9666666667 2.8178975332 59.5083792324 48.424954101
RIX:CC(015 x 018) m 30.365 2.8178975332 35.9067125657 24.8232874343
RIX:CC(015 x 059) m 33.4333333333 3.9851089089 41.2704984025 25.5961682642
RIX:CC(016 x 038) m 32.7333333333 2.8178975332 38.275045899 27.1916207676
RIX:CC(017 x 004) m 30.05 2.8178975332 35.5917125657 24.5082874343
RIX:CC(017 x 041) m 32.9166666667 2.8178975332 38.4583792324 27.374954101
RIX:CC(018 x 009) m 37.7 3.9851089089 45.5371650692 29.8628349308
RIX:CC(018 x 065) m 43.4 3.9851089089 51.2371650692 35.5628349308
RIX:CC(019 x 002) m 28.0090909091 2.0811552528 32.1019168828 23.9162649353
RIX:CC(019 x 004) m 34.6333333333 2.8178975332 40.175045899 29.0916207676
RIX:CC(019 x 027) m 32.6666666667 3.9851089089 40.5038317358 24.8295015975
RIX:CC(021 x 023) m 41.7333333333 3.9851089089 49.5704984025 33.8961682642
RIX:CC(022 x 024) m 41.6 3.9851089089 49.4371650692 33.7628349308
RIX:CC(022 x 044) m 29.7333333333 3.9851089089 37.5704984025 21.8961682642
RIX:CC(023 x 025) m 31.0166666667 2.8178975332 36.5583792324 25.474954101
RIX:CC(024 x 023) m 32.0833333333 2.8178975332 37.625045899 26.5416207676
RIX:CC(024 x 052) m 45.9333333333 3.9851089089 53.7704984025 38.0961682642
RIX:CC(025 x 028) m 49.55 2.8178975332 55.0917125657 44.0082874343
RIX:CC(026 x 034) m 38.6166666667 2.8178975332 44.1583792324 33.074954101
RIX:CC(027 x 036) m 20.7333333333 3.9851089089 28.5704984025 12.8961682642
RIX:CC(027 x 045) m 34.3 3.9851089089 42.1371650692 26.4628349308
RIX:CC(029 x 027) m 33.35 2.8178975332 38.8917125657 27.8082874343
RIX:CC(029 x 071) m 46.3 3.9851089089 54.1371650692 38.4628349308
RIX:CC(030 x 023) m 25.5666666667 3.9851089089 33.4038317358 17.7295015975
RIX:CC(030 x 061) m 41.0 2.8178975332 46.5417125657 35.4582874343
RIX:CC(032 x 013) m 27.75 2.8178975332 33.2917125657 22.2082874343
RIX:CC(032 x 017) m 21.3166666667 2.8178975332 26.8583792324 15.774954101
RIX:CC(033 x 046) m 21.875 2.8178975332 27.4167125657 16.3332874343
RIX:CC(035 x 020) m 28.4 3.9851089089 36.2371650692 20.5628349308
RIX:CC(035 x 071) m 50.9666666667 3.9851089089 58.8038317358 43.1295015975
RIX:CC(036 x 051) m 52.7333333333 3.9851089089 60.5704984025 44.8961682642
RIX:CC(037 x 046) m 21.4 3.9851089089 29.2371650692 13.5628349308
RIX:CC(037 x 057) m 27.8333333333 2.8178975332 33.375045899 22.2916207676
RIX:CC(038 x 013) m 42.05 2.8178975332 47.5917125657 36.5082874343
RIX:CC(039 x 020) m 57.0333333333 3.9851089089 64.8704984025 49.1961682642
RIX:CC(040 x 003) m 22.9666666667 2.8178975332 28.5083792324 17.424954101
RIX:CC(040 x 015) m 29.1333333333 3.9851089089 36.9704984025 21.2961682642
RIX:CC(041 x 012) m 50.1166666667 2.8178975332 55.6583792324 44.574954101
RIX:CC(041 x 016) m 51.2166666667 2.8178975332 56.7583792324 45.674954101
RIX:CC(042 x 017) m 16.9666666667 3.9851089089 24.8038317358 9.1295015975
RIX:CC(042 x 019) m 13.4366666667 2.8178975332 18.9783792324 7.894954101
RIX:CC(043 x 033) m 29.6 3.9851089089 37.4371650692 21.7628349308
RIX:CC(043 x 037) m 28.5166666667 2.8178975332 34.0583792324 22.974954101
RIX:CC(044 x 060) m 31.9666666667 3.9851089089 39.8038317358 24.1295015975
RIX:CC(045 x 044) m 49.5833333333 2.8178975332 55.125045899 44.0416207676
RIX:CC(046 x 068) m 24.7166666667 2.8178975332 30.2583792324 19.174954101
RIX:CC(049 x 036) m 37.2333333333 3.9851089089 45.0704984025 29.3961682642
RIX:CC(051 x 005) m 41.7285714286 2.6088661754 46.8592003091 36.5979425481
RIX:CC(051 x 009) m 41.15 2.8178975332 46.6917125657 35.6082874343
RIX:CC(052 x 007) m 38.4666666667 3.9851089089 46.3038317358 30.6295015975
RIX:CC(052 x 014) m 37.66 3.0868520874 43.7306419589 31.5893580411
RIX:CC(055 x 006) m 30.7666666667 3.9851089089 38.6038317358 22.9295015975
RIX:CC(055 x 028) m 12.7 3.9851089089 20.5371650692 4.8628349308
RIX:CC(056 x 033) m 41.4 3.9851089089 49.2371650692 33.5628349308
RIX:CC(057 x 052) m 36.4166666667 2.8178975332 41.9583792324 30.874954101
RIX:CC(058 x 022) m 29.1666666667 3.9851089089 37.0038317358 21.3295015975
RIX:CC(059 x 065) m 35.2166666667 2.8178975332 40.7583792324 29.674954101
RIX:CC(060 x 006) m 37.6333333333 2.8178975332 43.175045899 32.0916207676
RIX:CC(060 x 037) m 27.1666666667 3.9851089089 35.0038317358 19.3295015975
RIX:CC(061 x 025) m 40.8 3.9851089089 48.6371650692 32.9628349308
RIX:CC(061 x 026) m 30.5666666667 2.8178975332 36.1083792324 25.024954101
RIX:CC(061 x 039) m 66.0166666667 2.8178975332 71.5583792324 60.474954101
RIX:CC(062 x 046) m 32.8 3.9851089089 40.6371650692 24.9628349308
RIX:CC(062 x 072) m 38.6 3.9851089089 46.4371650692 30.7628349308
RIX:CC(063 x 001) m 48.1333333333 3.9851089089 55.9704984025 40.2961682642
RIX:CC(063 x 002) m 28.1666666667 3.9851089089 36.0038317358 20.3295015975
RIX:CC(065 x 010) m 33.2833333333 2.8178975332 38.825045899 27.7416207676
RIX:CC(065 x 072) m 29.4666666667 3.9851089089 37.3038317358 21.6295015975
RIX:CC(068 x 035) m 31.5333333333 3.9851089089 39.3704984025 23.6961682642
RIX:CC(068 x 043) m 28.6333333333 3.9851089089 36.4704984025 20.7961682642
RIX:CC(070 x 003) m 25.7333333333 3.9851089089 33.5704984025 17.8961682642
RIX:CC(072 x 063) m 40.9333333333 3.9851089089 48.7704984025 33.0961682642
RIX:CC(072 x 075) m 31.3 3.9851089089 39.1371650692 23.4628349308
RIX:CC(074 x 058) m 28.5333333333 3.9851089089 36.3704984025 20.6961682642
RIX:CC(074 x 062) m 31.4333333333 3.9851089089 39.2704984025 23.5961682642
RIX:CC(075 x 021) m 43.3 3.9851089089 51.1371650692 35.4628349308
RIX:CC(075 x 035) m 33.2333333333 3.9851089089 41.0704984025 25.3961682642




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA