Project measure / variable:   CSNA03   pct_omit_in_rev_Binghamton

ID, description, units MPD:112882   pct_omit_in_rev_Binghamton   percentage of responses considered omissions (reversal learning assay), founders   [%]  reversal  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses considered omissions (reversal learning assay), founders reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means25.329   % 26.739   %
Median of the strain means22.311   % 22.843   %
SD of the strain means± 17.766 ± 20.646
Coefficient of variation (CV)0.7014 0.7721
Min–max range of strain means7.3594   –   65.03   % 2.3999   –   60.65   %
Mean sample size per strain5.8   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 41.6622 41.6622 0.036 0.85
strain 7 14944.9023 2134.986 1.8469 0.0926
sex:strain 7 12560.9749 1794.425 1.5523 0.1651
Residuals 67 77449.7422 1155.9663


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 18.467 16.715   7 6.3177 0.9052 1.7857, 51.0 -0.39
129S1/SvImJ m 60.65 89.32   5 39.943 1.4728 6.3291, 219.0 1.64
A/J f 65.03 51.55   6 21.046 0.7927 4.878, 132.7 2.23
A/J m 29.991 26.788   4 13.394 0.8932 4.7945, 67.86 0.16
C57BL/6J f 14.853 9.612   5 4.2986 0.6471 1.1494, 28.205 -0.59
C57BL/6J m 52.08 62.17   6 25.381 1.1939 0.65789, 161.5 1.23
CAST/EiJ f 26.156 17.33   7 6.5501 0.6625 5.0, 56.67 0.05
CAST/EiJ m 15.882 14.155   4 7.0777 0.8913 2.2727, 32.653 -0.53
NOD/ShiLtJ f 14.063 8.8321   5 3.9498 0.6281 2.381, 23.529 -0.63
NOD/ShiLtJ m 11.816 8.9153   5 3.987 0.7545 2.4845, 24.603 -0.72
NZO/HlLtJ f 30.319 18.667   7 7.0554 0.6157 5.4348, 58.06 0.28
NZO/HlLtJ m 29.804 26.263   4 13.132 0.8812 4.0541, 64.36 0.15
PWK/PhJ f 7.3594 5.1979   4 2.599 0.7063 0.81967, 13.235 -1.01
PWK/PhJ m 2.3999 0.60394   5 0.27009 0.2517 1.5873, 3.0769 -1.18
WSB/EiJ f 26.385 18.041   5 8.0682 0.6838 4.7945, 53.03 0.06
WSB/EiJ m 11.292 7.0773   4 3.5387 0.6268 2.5641, 19.88 -0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 18.4667285714 12.8506047753 44.1166430572 -7.1831859143
129S1/SvImJ m 60.64562 15.2050406223 90.9950081055 30.2962318945
A/J f 65.0326666667 13.8802395611 92.7377407864 37.3275925469
A/J m 29.990625 16.9997522161 63.9222724397 -3.9410224397
C57BL/6J f 14.85348 15.2050406223 45.2028681055 -15.4959081055
C57BL/6J m 52.0750316667 13.8802395611 79.7801057864 24.3699575469
CAST/EiJ f 26.1562571429 12.8506047753 51.8061716286 0.5063426571
CAST/EiJ m 15.882175 16.9997522161 49.8138224397 -18.0494724397
NOD/ShiLtJ f 14.0626 15.2050406223 44.4119881055 -16.2867881055
NOD/ShiLtJ m 11.81644 15.2050406223 42.1658281055 -18.5329481055
NZO/HlLtJ f 30.3194 12.8506047753 55.9693144858 4.6694855142
NZO/HlLtJ m 29.804275 16.9997522161 63.7359224397 -4.1273724397
PWK/PhJ f 7.3594175 16.9997522161 41.2910649397 -26.5722299397
PWK/PhJ m 2.3999 15.2050406223 32.7492881055 -27.9494881055
WSB/EiJ f 26.3853 15.2050406223 56.7346881055 -3.9640881055
WSB/EiJ m 11.292025 16.9997522161 45.2236724397 -22.6396224397


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 39.5561742857 9.9540356567 59.4245126127 19.6878359587
A/J both 47.5116458333 10.9732928704 69.4144300739 25.6088615928
C57BL/6J both 33.4642558333 10.2938611633 54.0108887105 12.9176229561
CAST/EiJ both 21.0192160714 10.6551585922 42.2870016349 -0.2485694921
NOD/ShiLtJ both 12.93952 10.7515873323 34.3997781343 -8.5207381343
NZO/HlLtJ both 30.0618375 10.6551585922 51.3296230635 8.7940519365
PWK/PhJ both 4.87965875 11.4037804668 27.6416998291 -17.8823823291
WSB/EiJ both 18.8386625 11.4037804668 41.6007035791 -3.9233785791




  GWAS USING LINEAR MIXED MODELS