Project measure / variable:   CSNA03   pct_omit_in_acq_Binghamton

ID, description, units MPD:112881   pct_omit_in_acq_Binghamton   percentage of responses considered omissions (reversal learning assay), founders   [%]  acquisition  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses considered omissions (reversal learning assay), founders acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means58.94   % 43.766   %
Median of the strain means57.95   % 31.268   %
SD of the strain means± 38.558 ± 38.274
Coefficient of variation (CV)0.6542 0.8745
Min–max range of strain means17.84   –   123.7   % 4.0528   –   97.29   %
Mean sample size per strain6.0   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5398.3896 5398.3896 2.3739 0.128
strain 7 87850.7865 12550.1124 5.5189 < 0.0001
sex:strain 7 15970.1733 2281.4533 1.0033 0.4366
Residuals 69 156908.8816 2274.0418


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 74.84 42.905   7 16.217 0.5733 18.605, 130.6 0.41
129S1/SvImJ m 90.0 52.24   5 23.362 0.5804 16.923, 147.7 1.21
A/J f 123.7 75.95   6 31.005 0.614 42.604, 196.9 1.68
A/J m 74.41 51.93   6 21.2 0.6979 18.072, 147.2 0.8
C57BL/6J f 41.058 34.8   6 14.207 0.8476 3.0769, 105.8 -0.46
C57BL/6J m 42.558 67.05   6 27.373 1.5755 4.3478, 178.6 -0.03
CAST/EiJ f 90.6 54.42   7 20.57 0.6007 30.435, 187.8 0.82
CAST/EiJ m 97.29 68.66   4 34.329 0.7057 45.946, 196.3 1.4
NOD/ShiLtJ f 21.4 15.763   5 7.0496 0.7366 9.0909, 49.0 -0.97
NOD/ShiLtJ m 13.193 10.41   4 5.2049 0.7891 3.2787, 27.2 -0.8
NZO/HlLtJ f 77.65 68.27   7 25.803 0.8791 6.9767, 159.2 0.49
NZO/HlLtJ m 8.6448 5.0257   4 2.5129 0.5814 5.0, 15.789 -0.92
PWK/PhJ f 17.84 15.038   5 6.7253 0.8429 5.1282, 35.0 -1.07
PWK/PhJ m 4.0528 4.8172   4 2.4086 1.1886 0.76336, 11.215 -1.04
WSB/EiJ f 24.448 16.221   5 7.2544 0.6635 10.465, 48.214 -0.89
WSB/EiJ m 19.978 16.268   4 8.1342 0.8143 1.0417, 39.831 -0.62


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 74.8442857143 18.0239593007 110.8011006832 38.8874707454
129S1/SvImJ m 90.0006 21.326236246 132.5452772204 47.4559227796
A/J f 123.6956666667 19.4681010977 162.5334656924 84.857867641
A/J m 74.4053333333 19.4681010977 113.243132359 35.5675343076
C57BL/6J f 41.0583166667 19.4681010977 79.8961156924 2.220517641
C57BL/6J m 42.5576333333 19.4681010977 81.395432359 3.7198343076
CAST/EiJ f 90.5961428571 18.0239593007 126.5529578261 54.6393278882
CAST/EiJ m 97.2915 23.8434569751 144.8578951729 49.7251048271
NOD/ShiLtJ f 21.39978 21.326236246 63.9444572204 -21.1448972204
NOD/ShiLtJ m 13.1928 23.8434569751 60.7591951729 -34.3735951729
NZO/HlLtJ f 77.6548142857 18.0239593007 113.6116292546 41.6979993168
NZO/HlLtJ m 8.644825 23.8434569751 56.2112201729 -38.9215701729
PWK/PhJ f 17.84024 21.326236246 60.3849172204 -24.7044372204
PWK/PhJ m 4.05284 23.8434569751 51.6192351729 -43.5135551729
WSB/EiJ f 24.4478 21.326236246 66.9924772204 -18.0968772204
WSB/EiJ m 19.977675 23.8434569751 67.5440701729 -27.5887201729


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 82.4224428571 13.9612988408 110.2744719686 54.5704137457
A/J both 99.0505 13.766026303 126.5129710574 71.5880289426
C57BL/6J both 41.807975 13.766026303 69.2704460574 14.3455039426
CAST/EiJ both 93.9438214286 14.9446775592 123.7576374056 64.1300054515
NOD/ShiLtJ both 17.29629 15.9946771845 49.2047979153 -14.6122179153
NZO/HlLtJ both 43.1498196429 14.9446775592 72.9636356199 13.3360036658
PWK/PhJ both 10.94654 15.9946771845 42.8550479153 -20.9619679153
WSB/EiJ both 22.2127375 15.9946771845 54.1212454153 -9.6957704153




  GWAS USING LINEAR MIXED MODELS