Project measure / variable:   Schoonjans1   bw_pre_gluc_kinetic_HFD

ID, description, units MPD:112635   bw_pre_gluc_kinetic_HFD   body weight prior to glucose kinetic test, at 20 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 20wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schoonjans1 - body weight prior to glucose kinetic test, at 20 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means43.775   g
Median of the strain means44.157   g
SD of the strain means± 6.053
Coefficient of variation (CV)0.1383
Min–max range of strain means27.724   –   55.89   g
Mean sample size per strain4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 5913.9568 168.9702 8.7491 < 0.0001
Residuals 135 2607.2432 19.3129


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 39.382 6.2572   5 2.7983 0.1589 34.57, 49.01 -0.73
BXD100 m 52.38 5.2067   4 2.6034 0.0994 45.34, 56.83 1.42
BXD11 m 49.903 6.9101   3 3.9896 0.1385 43.43, 57.18 1.01
BXD12 m 31.87 2.6871   4 1.3435 0.0843 27.89, 33.67 -1.97
BXD27 m 42.728 3.2756   5 1.4649 0.0767 38.12, 46.75 -0.17
BXD32 m 42.36 2.4918   4 1.2459 0.0588 39.03, 44.48 -0.23
BXD34 m 41.136 6.1761   5 2.7621 0.1501 35.08, 49.3 -0.44
BXD39 m 42.656 1.9736   5 0.88261 0.0463 39.69, 44.49 -0.18
BXD40 m 34.627 6.9432   4 3.4716 0.2005 25.42, 41.77 -1.51
BXD43 m 43.87 4.2344   5 1.8937 0.0965 39.64, 50.34 0.02
BXD45 m 44.554 2.0998   5 0.93905 0.0471 41.4, 46.8 0.13
BXD48 m 49.44 5.0949   5 2.2785 0.1031 41.51, 53.75 0.94
BXD48a m 55.89 4.726   5 2.1135 0.0846 50.75, 60.73 2.0
BXD49 m 45.53 5.013   5 2.2419 0.1101 38.89, 50.79 0.29
BXD51 m 45.464 8.8942   5 3.9776 0.1956 37.09, 58.98 0.28
BXD53 m 49.282 3.7367   5 1.6711 0.0758 44.98, 55.08 0.91
BXD55 m 38.818 3.0021   5 1.3426 0.0773 35.88, 43.55 -0.82
BXD6 m 46.114 5.0807   5 2.2722 0.1102 37.1, 49.04 0.39
BXD62 m 40.146 2.0117   5 0.89965 0.0501 38.29, 43.41 -0.6
BXD63 m 46.676 3.1038   5 1.3881 0.0665 41.76, 49.3 0.48
BXD64 m 43.068 3.545   5 1.5854 0.0823 38.2, 46.75 -0.12
BXD66 m 45.758 4.0931   4 2.0465 0.0895 41.96, 50.72 0.33
BXD67 m 50.64 1.2671   5 0.56664 0.025 49.53, 52.82 1.13
BXD69 m 37.044 1.7212   5 0.76974 0.0465 35.09, 39.51 -1.11
BXD73 m 43.754 3.3114   5 1.4809 0.0757 39.28, 48.0 0.0
BXD75 m 44.444 3.2846   5 1.4689 0.0739 39.57, 47.57 0.11
BXD77 m 46.314 2.004   5 0.8962 0.0433 43.18, 48.6 0.42
BXD79 m 43.67 1.5865   5 0.70951 0.0363 41.34, 45.35 -0.02
BXD8 m 27.724 10.141   5 4.5351 0.3658 10.67, 37.6 -2.65
BXD81 m 42.614 4.142   5 1.8524 0.0972 40.09, 49.94 -0.19
BXD84 m 50.1 4.5953   5 2.0551 0.0917 43.9, 56.4 1.04
BXD87 m 33.775 2.6022   4 1.3011 0.077 30.69, 36.81 -1.65
BXD89 m 37.19 2.9596   5 1.3236 0.0796 33.52, 40.94 -1.09
BXD90 m 47.885 1.4247   4 0.71234 0.0298 46.42, 49.54 0.68
C57BL/6J m 52.52 2.7927   5 1.2489 0.0532 49.83, 57.25 1.44
DBA/2J m 46.578 3.1402   5 1.4044 0.0674 41.82, 50.54 0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 39.382 1.9653453854 43.2688483908 35.4951516092
BXD100 m 52.38 2.1973229405 56.7256286101 48.0343713899
BXD11 m 49.9033333333 2.5372499824 54.921233029 44.8854336377
BXD12 m 31.87 2.1973229405 36.2156286101 27.5243713899
BXD27 m 42.728 1.9653453854 46.6148483908 38.8411516092
BXD32 m 42.36 2.1973229405 46.7056286101 38.0143713899
BXD34 m 41.136 1.9653453854 45.0228483908 37.2491516092
BXD39 m 42.656 1.9653453854 46.5428483908 38.7691516092
BXD40 m 34.6275 2.1973229405 38.9731286101 30.2818713899
BXD43 m 43.87 1.9653453854 47.7568483908 39.9831516092
BXD45 m 44.554 1.9653453854 48.4408483908 40.6671516092
BXD48 m 49.44 1.9653453854 53.3268483908 45.5531516092
BXD48a m 55.89 1.9653453854 59.7768483908 52.0031516092
BXD49 m 45.53 1.9653453854 49.4168483908 41.6431516092
BXD51 m 45.464 1.9653453854 49.3508483908 41.5771516092
BXD53 m 49.282 1.9653453854 53.1688483908 45.3951516092
BXD55 m 38.818 1.9653453854 42.7048483908 34.9311516092
BXD6 m 46.114 1.9653453854 50.0008483908 42.2271516092
BXD62 m 40.146 1.9653453854 44.0328483908 36.2591516092
BXD63 m 46.676 1.9653453854 50.5628483908 42.7891516092
BXD64 m 43.068 1.9653453854 46.9548483908 39.1811516092
BXD66 m 45.7575 2.1973229405 50.1031286101 41.4118713899
BXD67 m 50.644 1.9653453854 54.5308483908 46.7571516092
BXD69 m 37.044 1.9653453854 40.9308483908 33.1571516092
BXD73 m 43.754 1.9653453854 47.6408483908 39.8671516092
BXD75 m 44.444 1.9653453854 48.3308483908 40.5571516092
BXD77 m 46.314 1.9653453854 50.2008483908 42.4271516092
BXD79 m 43.67 1.9653453854 47.5568483908 39.7831516092
BXD8 m 27.724 1.9653453854 31.6108483908 23.8371516092
BXD81 m 42.614 1.9653453854 46.5008483908 38.7271516092
BXD84 m 50.096 1.9653453854 53.9828483908 46.2091516092
BXD87 m 33.775 2.1973229405 38.1206286101 29.4293713899
BXD89 m 37.19 1.9653453854 41.0768483908 33.3031516092
BXD90 m 47.885 2.1973229405 52.2306286101 43.5393713899
C57BL/6J m 52.518 1.9653453854 56.4048483908 48.6311516092
DBA/2J m 46.578 1.9653453854 50.4648483908 42.6911516092




  GWAS USING LINEAR MIXED MODELS